| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2236 |
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| Symbol | |
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| ID | 5357882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2290515 |
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| End bp | 2291288 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640811289 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001347608 |
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| Protein GI | 152986616 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACC ACTCCATCAA GGGCAAGACC GTCCTCATCA CCGGCGGCGC CAAGAACCTG
GGTGGGCTGA TCGCCCGCGA TCTCGCTAGC CACGGCGCGA AGGCTATCGC CATCCATTAC
AACAGCGCGG CGAGCAAGGC CGATGCCGAC GCCACCGTCG CCGCGCTGCA GGCCGCCGGC
GCCAAGGCCG TGGCCCTGCA GGGCGACCTC ACCAGCGCGG CGGCCATGGA AAGGCTGTTC
GCCGACACCA TGGCCGCGGT CGGCAAGCCG GACATCGCGA TCAATACCGT GGGCAAGGTG
CTGAAGAAGC CCTTCACCGA AATCAGCGAA GCCGAGTACG ACGAGATGTC CGCGGTCAAC
GCCAAGTCGG CGTTCTTCTT CCTGCGCGAG GCCGGCAAGC ATGTCAACGA CAACGGCAAG
ATCTGCACCC TGGTGACCTC CCTGCTCGGC GCCTATACCC CTTACTACGC CGCCTACGCT
GGCACCAAGG CGCCGGTCGA GCACTTCACC CGTGCCGCCT CCAAGGAGTT CGGCGCGCGC
GGCATCTCGG TCACCGCGGT CGGCCCGGGA CCGATGGACA CGCCGTTCTT CTACCCCGCC
GAAGGCGCCG ACGCGGTGGC CTACCACAAG ACCGCCGCGG CGCTGTCGCC GTTCTCCAGG
ACCGGCCTGA CCGATATCGA GGACGTGGTG CCGTTCATCC GCCACCTGGT CAGCGACGGC
TGGTGGATCA CCGGCCAGAC CATCCTCATC AACGGCGGCT ACACCACCAA GTGA
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| Protein sequence | MADHSIKGKT VLITGGAKNL GGLIARDLAS HGAKAIAIHY NSAASKADAD ATVAALQAAG
AKAVALQGDL TSAAAMERLF ADTMAAVGKP DIAINTVGKV LKKPFTEISE AEYDEMSAVN
AKSAFFFLRE AGKHVNDNGK ICTLVTSLLG AYTPYYAAYA GTKAPVEHFT RAASKEFGAR
GISVTAVGPG PMDTPFFYPA EGADAVAYHK TAAALSPFSR TGLTDIEDVV PFIRHLVSDG
WWITGQTILI NGGYTTK
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