| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2107 |
|---|
| Symbol | |
|---|
| ID | 5355549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2158348 |
|---|
| End bp | 2159742 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640811160 |
|---|
| Product | cytochrome c Snr1 |
|---|
| Protein accession | YP_001347480 |
|---|
| Protein GI | 152983498 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.257999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCT GGAAGCGCCA TGCCCTGTGG GCCATGCCGC TCGTCCTGGG GTTGCCAGTC
TCCGCCGCCG CGGAGGAGCA GCCAAGCAAG ACCTCCAGCT ACATGCCGGT GGTGATAAAC
GAGGATTTCG CCGCCATCAT GAAGCGCATG ACGGCGAACA AGCCGTCGAT CGAGCAGACC
CACAAGACCC TGCTCGAACA GCGCTACGAC CTCAGCGACC GGCCGGCCAA GGAGGCCAGC
ATGACCCGTG GCAAGCCGCT GCAGGAGGGC GTGCGGGTGA AACTGCCGGC CGGCACCGAC
TGGGACGAGC TGGCCCGCCT GAGCCCGGAG GAAATCCGCA AGCAGGGCCT GTTCCCCGGC
GGCTTCCTGC CGCTGCCGCA TCCCAACCAC GCCGAAGGCG GGATGGTCTT TCCGAAATTC
CTCATCGACG AGGTCAAGCG CCAGGAAAAC CGCGACCTGA CCCGCTTCGA CCTGGACTTC
GACCTGCCGG ACCATTTCCT GCCCGAATTC CCGGCACCGA TGTTCCTCAC CACGCGGCCG
GACCTGGGCG ATGTATCCAG GGGCAGGCTG GTGACCATCG ACAACTACTT CGAACTGTTC
AACGGGATTC TCAATCCCAA GCAGCTGGAA GGCCTGCGCC TGCTGCTCAC GGCCTTCCCG
CAGCAGCAGT TCAACCTCAC CGACGATCGC CGCAGCGAAC ACCCGAGCCG CGGCGTGGCC
TGCTTCGACT GCCACGCCAA CGGCCACACC AACGCCGCCA CCCACCTGGC CGGCGACGCG
CGTCCGCAGC CGTTCCGCCA TCGCATCGAT ACGCCGACAT TGCGCGGGGT CAACATCCAG
CGCCTGTTCG GCTCGCAGCG GGCGCTGAAG ACCGTCGAGG ACTTCACCGA GTTCGAACAG
CGGGCGGCCT ATTTCGACGG CGATCCGGTG ATCGCCACCA AGAAGGGCGT GAATGTCCTG
GAGCGCGGCA GCCAGGTCCA TTTCATGGGC GAATTCCAGG CGCTGCTGGA CTTCCCGCCG
GCGCCGAAGC TGGACGTGGA GGGCCGCCTC GACCCACGCA AGGCCAGCGA GCAGGAGCTG
CGTGGCGAGA AGCTGTTCTA CGGCAAGGCG GCCTGCGCCG GTTGCCATGC GCCGCCATAT
TTCACCGACA ATCTGATGCA CAACCTGAAG CTGGAGCGCT TCTACGATCC GAAGCTGGTC
AACGGGGTGA TGGCTGCCGC CGATGGACCG ATCAAGACCT TCCCCTTGCG CGGGATCAAG
GACTCGCCAC CCTACCTGCA CGACGACCGC CTGCTGACCC TGGAGGACAC GGTGGAATTC
TTCAACCTGG TGCTGGCACG CAAGCTGAAC GCCCAGGAGA AGTCTGACCT GGTGGCTTAC
CTGCGTGCCC TGTAG
|
|---|
| Protein sequence | MPAWKRHALW AMPLVLGLPV SAAAEEQPSK TSSYMPVVIN EDFAAIMKRM TANKPSIEQT
HKTLLEQRYD LSDRPAKEAS MTRGKPLQEG VRVKLPAGTD WDELARLSPE EIRKQGLFPG
GFLPLPHPNH AEGGMVFPKF LIDEVKRQEN RDLTRFDLDF DLPDHFLPEF PAPMFLTTRP
DLGDVSRGRL VTIDNYFELF NGILNPKQLE GLRLLLTAFP QQQFNLTDDR RSEHPSRGVA
CFDCHANGHT NAATHLAGDA RPQPFRHRID TPTLRGVNIQ RLFGSQRALK TVEDFTEFEQ
RAAYFDGDPV IATKKGVNVL ERGSQVHFMG EFQALLDFPP APKLDVEGRL DPRKASEQEL
RGEKLFYGKA ACAGCHAPPY FTDNLMHNLK LERFYDPKLV NGVMAAADGP IKTFPLRGIK
DSPPYLHDDR LLTLEDTVEF FNLVLARKLN AQEKSDLVAY LRAL
|
|---|
| |