Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1703 |
Symbol | |
ID | 5358448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1742070 |
End bp | 1742954 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640810756 |
Product | putative transcriptional regulator |
Protein accession | YP_001347087 |
Protein GI | 152984027 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0448635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACGC CATCATCCAG TACGTGGATG AAGTCGCGGC ACTGTTCCGC CGACGACGGC GATGGCATCC TTCATCCCAT GCAGCCCGAA CAAGCCATTG CCGACGACCG CGACCTCGCC GACGCCACCC GCGAGACCGT GATGCGTTAC CACCTCAGCT GGAAGCACCG CGACATCGAC GCGGTGATGG CGCTCTATCA TCCCGAGGTC GAATACAACG ACTTCTTCCA GAACCGCCGG ATGCGCCTGG CCGATCTCCG CGAGTACGTC GAGGCGACCA TGCCCAAGGG CCCCGACGAG TCGCTGGAGC ACACCGACCG TATCCGCTTC GACGGCGATA CCGCGTTCAT CCAGTACCGC CTGCGCGTGA CCCTAAGCGG CCGCCTGGCT TCGTTCCGCG CCAGCGAGGC GATCAGCGTG CGCGACGGCC TGATCTGGCG CATCAACGAA TACGCCTCGC TGGTCCACGA AAGCGGCGGC GGAGCCCAGG CCGGCGGCGA CGGCCGGCCG CCGGCCAGCC GCCTGGGGCT TTCGGCCAAG CAGCTGAGCC TGCTGGCGCG CGACCTGGAG CACTACTTCC AGCAGGCCCA GCCCTATCTC GACCCGGACC TGGACCTGAC CCAGGTGGCC AACGCCACCG GCTACACCCG CAACCAGATT TCCTACCTGC TCAACCAGGT GCTCGGCCTG AGCTTCTACC AGTACGTCAA CCAGACCCGC CTGCAGCACC TGCTTGGCCA GCTCTCCGGC GAGCTGCCCG GACGGGTCGA CGAACTGGCC TTCGCCGCCG GCTTCAATTC GCTGTCGGCC TTCTACCGCT GTTTCCGCCA GCACACCGGC CAGTCACCGC GCGAATACCT GAAGCGCCTG TCGCCGCGCC GCTGA
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Protein sequence | MDTPSSSTWM KSRHCSADDG DGILHPMQPE QAIADDRDLA DATRETVMRY HLSWKHRDID AVMALYHPEV EYNDFFQNRR MRLADLREYV EATMPKGPDE SLEHTDRIRF DGDTAFIQYR LRVTLSGRLA SFRASEAISV RDGLIWRINE YASLVHESGG GAQAGGDGRP PASRLGLSAK QLSLLARDLE HYFQQAQPYL DPDLDLTQVA NATGYTRNQI SYLLNQVLGL SFYQYVNQTR LQHLLGQLSG ELPGRVDELA FAAGFNSLSA FYRCFRQHTG QSPREYLKRL SPRR
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