| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1472 |
|---|
| Symbol | |
|---|
| ID | 5353771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1493756 |
|---|
| End bp | 1494961 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640810525 |
|---|
| Product | putative pyridoxal-phosphate dependent enzyme |
|---|
| Protein accession | YP_001346856 |
|---|
| Protein GI | 152983866 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGC CGTCCCCCTG GCGCGCCGAC TTCCCGGCCC TGTCCGCCCT CGCCGCGGAA
GGCCTGACCT ACCTCGACAG CGCCGCCACC GCCCAGAAGC CGCAGGCCGT CCTCGATGCC
CTGAACGGCT ACTACCTCGG CGGCGCCGCC AATGTCCACC GCGCCCAGCA CGTCCCCGGC
GAACGCGCCA CCCGCGCCTT CGAGGCCGCT CGCAGCCGGG TCGCGCACTG GCTGCACGCC
AGCAACCCGG CGGAAGTCCT GTTCACCCGC GGCACCACCG AGGCGATCAA CCTGGTGGCC
TATGGTCTGG AGCGGCATTT CCGAGCGGGC GACGAACTGC TGGTCAGCGC CCTGGAACAC
CACGCCAACC TGCTCCCCTG GCAACAGCTG GCATTGCGCC GCGGCCTGGT GCTACGCGTG
CTGCCGCTGG ACGACCGCGG GGTGATCGAC CTGGAGCAGG CCCGGCGGCT CATCGGCGCG
CGTACCCGCC TGCTGGCGGT CAGCCAGCTT TCCAACGTCC TCGGCACCTG GCAGCCAGTG
GTGGAGCTGA TCCAACTGGC CCGCGAACAG GGCGCCTGGA CCCTGGTCGA TGGTGCCCAG
GGCAGCGTCC ATGGCCGCCA CGACCTGCCG GGCCTGGGCT GCGACTTCTA TGCGTTCTCC
AGCCACAAGC TCTACGGCCC CGACGGCGTC GGTGTGCTCT GGGGCCACCC TCAAGCGCTG
GAACAACTGG CGCACTGGCA GTTCGGCGGC GAGATGGTGC GCCATACCGA CTTCCAGCAC
GCCAGCTTCC ATGCCGCGCC GCTCGGTTTC GAGGCAGGAA CCCCGGCGGT TTCGGCGGTG
CTCGGTCTCG GTGCGGCCAT CGACTGGCTG GCGACCCTCG ACGAAGCCGA AGTCGCCGCC
CATGAAGGTG CCCTTCACGC CCGCCTGCTC GCCGGCCTGC GTGCGCGCGA CGGCCTCAGG
CTGCTCGGCG AGCCGCAGGC GGCGCTGGCC AGTTTCTGCG TCGAGGATGC GCATGTCGCC
GACCTCGCCC ACCTGCTCGG CGAACAGGGC ATCGCCGTGC GTGCCGGCCA CCACTGCGCG
ATGCCACTGC TGCAACGTCT CGAGGTACCC GGTGCCCTGC GCGTGTCGCT GGGCTTGTAC
AACGACGCCG ACGACCTGGA GCGGTTCTTC CTGGCCCTCG ACCGATCCCT GGAGCTGCTG
CGATGA
|
|---|
| Protein sequence | MSLPSPWRAD FPALSALAAE GLTYLDSAAT AQKPQAVLDA LNGYYLGGAA NVHRAQHVPG
ERATRAFEAA RSRVAHWLHA SNPAEVLFTR GTTEAINLVA YGLERHFRAG DELLVSALEH
HANLLPWQQL ALRRGLVLRV LPLDDRGVID LEQARRLIGA RTRLLAVSQL SNVLGTWQPV
VELIQLAREQ GAWTLVDGAQ GSVHGRHDLP GLGCDFYAFS SHKLYGPDGV GVLWGHPQAL
EQLAHWQFGG EMVRHTDFQH ASFHAAPLGF EAGTPAVSAV LGLGAAIDWL ATLDEAEVAA
HEGALHARLL AGLRARDGLR LLGEPQAALA SFCVEDAHVA DLAHLLGEQG IAVRAGHHCA
MPLLQRLEVP GALRVSLGLY NDADDLERFF LALDRSLELL R
|
|---|
| |