| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1410 |
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| Symbol | gspJ2 |
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| ID | 5354167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1427007 |
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| End bp | 1427606 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640810463 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001346794 |
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| Protein GI | 152985895 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0118952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAGC GCGGCTTCAC CCTGCTCGAG GTACTGATCG CCATGGCCCT GTTCAGCCTG
CTCGGCCTGG CCTGCTACCA GTTGCTCGAG CGGGTCCTGC ACAGCGAGCG GCGCATCGAC
CAGCACGACC GGCAACTGCG CCAGCTGCAA CGCGCGCTGG GCATCTTCGA GCGCGACCTG
AGCCAGGCCA TCGGCCAGCC GCTGAGCGAC GACCCGAGCC GCCGCCAGGC GCTGATCGGC
CGCGCCGACG GCCTGCGTCT GGTGCGCGGC GGCTGGAGCA ATCCGCTGGC GCAGAGGCGC
AGCGAGGTGC TGGAAGTGAG CTACCGCTGG CAGGACGACG CCTGGATCCG CGAGTACCGC
AGCCCGCCGG AGCGCGACCA GGACGTGCCC GCCGGCCACA GCCAGCGGCT GCTCGAGGGG
GTGGCCCTGA GGCGCCTGGG CTATGTCGAC GCCCACGGCC GCACGCACCC CGCCTGGCCC
GCCCACGGCG CGCCGCTGAG CCTGCCACAG GCGATCGACA TCGAGTTCGA CGCGCCCGGC
TATCCCGGCC TGCGCCGGGT CGTCCTGCTG CCCGGCGGCC AGGAGCGCGA CGATGAGTGA
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| Protein sequence | MKQRGFTLLE VLIAMALFSL LGLACYQLLE RVLHSERRID QHDRQLRQLQ RALGIFERDL
SQAIGQPLSD DPSRRQALIG RADGLRLVRG GWSNPLAQRR SEVLEVSYRW QDDAWIREYR
SPPERDQDVP AGHSQRLLEG VALRRLGYVD AHGRTHPAWP AHGAPLSLPQ AIDIEFDAPG
YPGLRRVVLL PGGQERDDE
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