Gene PSPA7_1038 details

Gene Information

• Locus tag: PSPA7_1038
• ID: 5354337
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 1040811
• End bp: 1041515
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640810092
• Product: ABC transporter ATP-binding protein
• Protein accession: YP_001346424
• Protein GI: 152983686
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAC TGATCACCCT GAGCAACCTC GGCTTCGCCT GGCCCGGCCA GGCGGAGTTG 
CTGGACATCC CCAGCTTCCA TCTCGAACGC GGCGAGAGCC TGTTCCTCAA GGGGCCTTCC 
GGCAGCGGCA AGACCACCCT GCTCGGCCTC CTTGGCGGCG TGCAGAAGCC CGGCCGCGGC 
AGCATCCGCC TGCTCGGCGA GGACCTGGAA AAGCTGTCCG CCGCGCGCCG CGACCATTTC 
CGCGTCGACC ACACCGGCTA CATCTTCCAG CAGTTCAACC TGCTGCCGTT CCTTTCGGTG 
CGCGAGAACG TCGAACTGCC CTGCCACTTT TCCACCTTGC GCCGCCAGCG CGCCCGCGAA 
CGCCACGGCA GCCCGGCGCA GGCCGCCAGC CACCTGCTCG GCCAGCTCGG CCTCGGCGGC 
GAACTGCACG AACGCCGCGC CGACAGCCTG TCCATCGGCC AGCAGCAGCG GGTCGCCGCC 
GCCCGTGCGC TGATCGGCCA GCCGGAACTG GTGATCGCCG ACGAGCCGAC CTCGGCGCTC 
GACGCCGACA GCCGCGAGGC GTTTCTCCAA CTGCTCTTCG CCGAATGCCG CGAGGCCGGC 
GCCAGCCTGC TGTTCGTCAG CCACGACCAG AGCCTGGCCG GGCTGTTCGA CCGCAGCCTG 
TCCCTTTCCG ATCTCAACCG CGCCGCCCGG CCGGTAGGAC TCTGA 

 

Protein sequence

MSALITLSNL GFAWPGQAEL LDIPSFHLER GESLFLKGPS GSGKTTLLGL LGGVQKPGRG 
SIRLLGEDLE KLSAARRDHF RVDHTGYIFQ QFNLLPFLSV RENVELPCHF STLRRQRARE 
RHGSPAQAAS HLLGQLGLGG ELHERRADSL SIGQQQRVAA ARALIGQPEL VIADEPTSAL 
DADSREAFLQ LLFAECREAG ASLLFVSHDQ SLAGLFDRSL SLSDLNRAAR PVGL