Gene PSPA7_1014 details

Gene Information

• Locus tag: PSPA7_1014
• ID: 5356830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 1013042
• End bp: 1013605
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640810068
• Product: type I pilus biogensis protein FimA
• Protein accession: YP_001346400
• Protein GI: 152986138
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3539] P pilus assembly protein, pilin FimA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATGT TCAAGCGTAG CGTTCTCGCT CCCCTCGCCG TTTCCGGCGC TCTCCTGGCC 
ATGGGATCTC CCGCGTTCGC CGCCGATGGC GTGGTCAACT TCATGGGCAG CATCTCCGAC 
GTGACCTGTG ACATCAACGG CCAGGCGCCG GGTATCGGCA ACGTCACCCA TGTCGACCTG 
GGTACCGTAG CTCCCGGCGT ATTCACCGCG GTCGGCACCG CATCCCCCTT CAAGAACTTC 
GACCTGGTCC TGTCCGGCGC CGGCTGCACC GATGGCAAGA AGGCTTCCAT CGCCTTCGAC 
GCCGTGACCA ACGTGGACCA GTCCACCGGC AACCTGAAGC TGACCAGCAA CTCCCCGGCT 
GGCGGCGTGC AGATCCAGAT CTACAACAAC GCCGGCAACA ATTCCAAGAT CCCGCTGGGC 
TCGGCCGAGG CTTCGCCGCA ACAGGCCGAG ATCAAGAACA ACACCGCGAC CCTGAAATAC 
AAGGCGTCCT ATGTCTCCAC CGCCGCCACC GTCACTCCGG GCAGCGGCGT GTCCCATATC 
CGCTACGTGC TGGCGTACCA GTAA 

 

Protein sequence

MNMFKRSVLA PLAVSGALLA MGSPAFAADG VVNFMGSISD VTCDINGQAP GIGNVTHVDL 
GTVAPGVFTA VGTASPFKNF DLVLSGAGCT DGKKASIAFD AVTNVDQSTG NLKLTSNSPA 
GGVQIQIYNN AGNNSKIPLG SAEASPQQAE IKNNTATLKY KASYVSTAAT VTPGSGVSHI 
RYVLAYQ