Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0878 |
Symbol | |
ID | 5355143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 872191 |
End bp | 873915 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640809932 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001346264 |
Protein GI | 152988486 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0730898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCTGT TCGAACGAAT GCGCGCGCTG CCCGAGGAGT GCCGTGCCGC GTTGCGCCGG GCGAGCGCCT GGGCGGTCCT GGCGGCGCTG CTGGACGCCG CCTGCGGCGT ATTGCTGGTG CCGCTGGTCG AGGCCTGGTT CGCCGAAGGC GCGTTGCCCT GGCGCTGGCT CGCCGCGTTG CTCGGCCTGA GCCTGGCGCA GGCGCTGGTG CAATACCTGG CCCTGCGTCG CGGTTTCGCC GCCGGCGGCT CGCTGGCGGC CGGGCTGGTG CGCAGCCTGG TGGCGCGCTT GCCGCGCCTG GCGCCGCCGG CGCTGCGCCG GGTCGCGCCG GCCGAAGGCC TGCTGCGCGG TCCGGTGCTG CAGGCGATGG GCATCCCGGC GCACCTGCTG GGGCCGCTGA TCGCCGCGTT GGTGACGCCG CTCGGGGTGA TCCTCGGGCT GTTCCTGATC GACCCGTCCA TCGCCCTCGG CCTGCTCGTC GCCAGTGCCG CCCTCGCCGC GCTGCTGCGC TGGAGCGGGC GGCGCAACCT GGCGGCGGAG GATGCCCGGT TGGCCGCCGA GCGCGACGCC GCGCGGCAGT TGCAGGCGTT CGCCGAACGC CAGCCGCTGC TGCGCGCGGC GCAGCGCGAA AGTGTCGCCC GCCAGGGCCT GGAAGAGGCC TTGCGCAGTC TCCATCGCAG CACCCTGGAA CTGTTGCGGC GCAGCCTGCC CAGTGGGCTC GGCTTCGCCC TGGCGGTGCA GGCGGCGTTC GCCTTCGCCC TGCTCGGCGG CGCCTGGGCG GTGGAGCGGC AATGGCTGGA CGGCGCGCGA CTGGTGGCGG TGCTGGTGCT GCTGGTGCGC TTCATCGAGC CGCTGGCCCA GCTCACCCAT CTCGACCAGG CGTTGCGCGG CGCCTGGCAG GCGCTGGACA GCCTGCTGCG GGTGTTCGCC CTGGCTCCGC TGCGCAGCCC CGAGCCGGGC GAGCGGCCGC ACGACGCCAG CCTGGCGGCC GAGGCCGTGG AATTGCGTCT GGAAGATGGC CGCGCCTTGC TTGAGGACAT TTCCCTGAGG CTGGAGCCGG GTACGCTGAA CGTCCTCGTC GGCCCCTCCG GGGCCGGCAA GAGCAGCCTG CTGGCGCTGC TCGGGCGGCT CCACGACGCC GACGGCGGGC GCGTCCTGCT GGGTGGCGTG GATGTCCGCC GGTTGAGCGA AACGGCCCTC GCCGCCAGTC GCAACCTGGT ATTCCAGGAC AACGGCCTGT TCCGCGGCAG CGTCGCCTGG AACCTGCGCA TGGCGCGACC CGACGCCGAT CTCCAGGCGC TCCGGGAGGT GGCGCGGGCG GTTGGCCTGC TGGAAGAGAT CGAGGCCTGG CCGCAGGGCT GGGACAGCGA TGTCGGCCCC GGCGGCGCGC TGCTTTCCGG CGGCCAGCGG CAGCGCCTGT GCCTGGCGCG CGGCCTGCTT TCGACGGCGC CGCTGCTGCT GCTCGACGAA CCCACCGCGA GCCTCGATGC CGCCAGCGAG GCGCAGGTGC TGCGCAGCCT GCTCGGGTTG CGTGGCCGCC GCACCCTGCT GGTAGTGACC CATCGCCCGG CGCTGGCGCG CCTCGCCGAC CAGGTGCTGG TGCTGGAGGA GGGCCGCCTG CGCGCGCGCG GCGAGCATGC CGGGCTGAGT GCCGGCGATG CCTGGTACGC CGCTTTCGCC GGCGCGGCGG CGGGGGAAAG TTCCACGTCC GCCGTGGATC GATAG
|
Protein sequence | MNLFERMRAL PEECRAALRR ASAWAVLAAL LDAACGVLLV PLVEAWFAEG ALPWRWLAAL LGLSLAQALV QYLALRRGFA AGGSLAAGLV RSLVARLPRL APPALRRVAP AEGLLRGPVL QAMGIPAHLL GPLIAALVTP LGVILGLFLI DPSIALGLLV ASAALAALLR WSGRRNLAAE DARLAAERDA ARQLQAFAER QPLLRAAQRE SVARQGLEEA LRSLHRSTLE LLRRSLPSGL GFALAVQAAF AFALLGGAWA VERQWLDGAR LVAVLVLLVR FIEPLAQLTH LDQALRGAWQ ALDSLLRVFA LAPLRSPEPG ERPHDASLAA EAVELRLEDG RALLEDISLR LEPGTLNVLV GPSGAGKSSL LALLGRLHDA DGGRVLLGGV DVRRLSETAL AASRNLVFQD NGLFRGSVAW NLRMARPDAD LQALREVARA VGLLEEIEAW PQGWDSDVGP GGALLSGGQR QRLCLARGLL STAPLLLLDE PTASLDAASE AQVLRSLLGL RGRRTLLVVT HRPALARLAD QVLVLEEGRL RARGEHAGLS AGDAWYAAFA GAAAGESSTS AVDR
|
| |