Gene PSPA7_0517 details

Gene Information

• Locus tag: PSPA7_0517
• ID: 5355452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 530322
• End bp: 530933
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640809571
• Product: chemotactic transduction protein ChpE
• Protein accession: YP_001345912
• Protein GI: 152984944
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.581083
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGCCA TCTTTCTCGC TGCCCTGCTG TTCGGTTTTG CCTTCAATAT CTCCCCTGGA 
GCGGTGTTCA GCGAAACGCT GCGCCGCGGT TTGACCGGTG GCTTCCGCCC GGCGTTGCTG 
GTGCAGTTGG GCTCGTTGAT CGGCGATGCG GTCTGGGCCC TGCTCGGCCT TACCGGACTG 
GCGCTGCTGC TGGGCTACGA GCAGGTGCGG ATGCCCCTGA CCCTGGTTTG CGCCGTCTAC 
CTGGCCTGGC TCGGCGTGCA GGGCCTGCGC GACGCCTGGA ATCCACCGCT GGCGGCGGAA 
AACGTCGGCG AGCAGGGACG CAACGCCTTC GGCGCCGGCG CGGCGATCTC CCTGTCCAAC 
CCGAAGAACC TGGTCTATTG GGGGGCCCTC GGCAGCGCCC TGGCGGGGAT CGTCGACGGC 
ACGCCGAACC AGGCGCAGTC GCTGGTGTTC TTCGCCGGCT TCATGCTCTC GTCGCTGATC 
TGGTGCTTCT GCTGCGCAGC GCTGGTGGAC TGGCTGCGGC GCAACACCTC GCTGTTCTGG 
CACCGCGTCA GCTACGCCGG CTGCGGCGTG CTCCTGCTCG GCCTGGCGGG ATTGGCGCTG 
CGCGGCCTGT AG 

 

Protein sequence

MLAIFLAALL FGFAFNISPG AVFSETLRRG LTGGFRPALL VQLGSLIGDA VWALLGLTGL 
ALLLGYEQVR MPLTLVCAVY LAWLGVQGLR DAWNPPLAAE NVGEQGRNAF GAGAAISLSN 
PKNLVYWGAL GSALAGIVDG TPNQAQSLVF FAGFMLSSLI WCFCCAALVD WLRRNTSLFW 
HRVSYAGCGV LLLGLAGLAL RGL