Gene Mmwyl1_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3870 
Symbol 
ID5364871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp4370823 
End bp4371392 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content42% 
IMG OID640806260 
ProductOmpA domain-containing protein 
Protein accessionYP_001342704 
Protein GI152997869 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.5346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.416173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TTATTCCAGT AATCGCAGGT AGCATCGCTA TAGCCTCATT CAGTGCCGCG 
GCAAAGGCGG AAGATATGGC TGAAAATAAC AGTGGTTTCT ATGTTGGCGG TAATTACGGT
TATCTTAAAG TGGAAAGCGA TGATGACTTT GATGACGATA ACGATGTAGT ACAAGGTATT
GTCGGTTACC GTTTCAACTC TTTCCTTGCA TTAGAAGGTA GTTACATTGA CTTTGGTAGC
TACGGCAACA GTGTAGCAAA TGCAGAAACA ACTGGTTACA CAGCCGCGTT AAAAGGGACA
ATTCCCATCA CTCAAACGGT TGAGCTCTTT GCAAAAGCTG GCCAGCTTTG GCATGAAACA
GATTATAACA TCGCCTCAGT TAAAGGCAGT TCAGACGATA GAAGCTTATT TGCAGGCGCA
GGTGTTAACT TCAAAGTAAC AGAAAACTTA CTGGTTAACG CTCAATATAC ATGGTACGAC
GTTGATCTAA ACGCAGATAA CGTTGACTCT GATTCAGACT TCGACTCTGA TTTTAAACAA
GCTAGTGTTG GTGCTGAATA CCGCTTCTAA
 
Protein sequence
MKKFIPVIAG SIAIASFSAA AKAEDMAENN SGFYVGGNYG YLKVESDDDF DDDNDVVQGI 
VGYRFNSFLA LEGSYIDFGS YGNSVANAET TGYTAALKGT IPITQTVELF AKAGQLWHET
DYNIASVKGS SDDRSLFAGA GVNFKVTENL LVNAQYTWYD VDLNADNVDS DSDFDSDFKQ
ASVGAEYRF