| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3829 |
|---|
| Symbol | |
|---|
| ID | 5369075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4317188 |
|---|
| End bp | 4318684 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640806219 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001342663 |
|---|
| Protein GI | 152997828 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.214252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTATT TATCTTCACC AGAATGGGCA AATAAAATCG CCCTAGTACA ACAAGACAAA
CAGTTAACCT ATCAAGCGCT AGCCGATTCC GTGACAGCTC GTAAAAACTG GCTGATAGAG
CAACAAGTCT CTCGCGTTGC TATCGCCATG GATAACACCA TTGAATGGGT GTTGTTTGAC
CTAGCATGCC AAGACGCAGA GCTTTGTTGT GTGCCAGTAC CGAGCTTTTT CAGCCCTCAA
CAAACGGCTC ACTTGCTTAA TGAAAGCGGC ATCGAATTGA TGCTAACACA AGACAAAAAT
AGCCCCAGTG ATAGGAACAG CCCAGCTAAC CATGACGCGA CGGATAGCCC ATTTGATGGT
GTTTTCATCT CTCGTTTAGC AGTAAAAAAC GAGCCGGAGA TTCCAACAGG GACAAATAAA
ATCACCTTTA CATCTGGCAC TACAGGCAGC CCGAAAGGCG TTTGTTTGAG CAACGAAGCA
CAATTAAATG TCGCTCACTC TCTTGCTGAA GCAGTAGCAC TTCAAGACGT TCGTCATTTG
TGTTTATTGC CGTTGGCGAC TTTGTTAGAA AATATCGCGG GGATTTATGC GCCTCTTTTA
GTTGGCGGCA CCATTGTTTT GGCAAGCCAA GAAGAACGTG GTTTTAGTGG CAGCCGTTTG
GCTCAACCGC AACAATTACT AGCACTGATC AGCCAACAAC AACCAACCAG TTTGATTTTA
GTACCAGAGC TGCTTTCGCT GTTTGTCGGC GCCTGTCAGC AAGGTTGGAA GCCTCCACAG
TCCTTAAAAT TTATCGCTGT CGGCGGCGGA AAAGTCGCTG CAGGGTTGGT GCAAAAAGCA
CACGCTCTTG GTCTCCCTGT TTATCAAGGT TACGGCCTGT CTGAATGCGC GTCTGTGGTG
TCATTAAATA CACCTGCGCA AGAAGACCAA GCCTCTGCCG GAGCCGTGTT GCCCCATAAT
CAATTACATA TTGAGCAAGG AGAATTGGTA ATCACTGGCA ACCTTTTCCT TGGTTACCTA
AATCAACCAG AAAGCTTTTA TCCACAAGAA GTTCGTACTG GTGACTTAGT CAACTTAACA
AACGCTTTTC TGAATATTAA TGGTCGCCAG AAGAACATCA TTATTAACTC TTTTGGTCGC
AACTTGTCAC CAGAATGGGT AGAAGCCGAG CTCATGGCGA CGGGTTATTT CCGCGAAGCA
TTGGTATTTG GTGAAGCAAA ACCTTATTGC GGCGCATTAC TCAGCCCTGC TGCAGCGCAC
ATCACTGAAG ACCAGATCCA ACAAGTGATC TCAATGGTCA ATCAGCAACT ACCAGATTAC
GCCCGCATTG GCACTTGGAT TCCACTAGCG CAGCCATTGA TGACTATTCC GGGCATGGTC
ACCGCCACAG GAAAACCGAT TCGCGACAAC ATTCTGGCGC ACTTTGCCGG CCAAATTGAA
CCCTTATACC AAGACACTTT TTCACAATTA AACACCGCAT TTGGAGAATC ACTATGA
|
|---|
| Protein sequence | MWYLSSPEWA NKIALVQQDK QLTYQALADS VTARKNWLIE QQVSRVAIAM DNTIEWVLFD
LACQDAELCC VPVPSFFSPQ QTAHLLNESG IELMLTQDKN SPSDRNSPAN HDATDSPFDG
VFISRLAVKN EPEIPTGTNK ITFTSGTTGS PKGVCLSNEA QLNVAHSLAE AVALQDVRHL
CLLPLATLLE NIAGIYAPLL VGGTIVLASQ EERGFSGSRL AQPQQLLALI SQQQPTSLIL
VPELLSLFVG ACQQGWKPPQ SLKFIAVGGG KVAAGLVQKA HALGLPVYQG YGLSECASVV
SLNTPAQEDQ ASAGAVLPHN QLHIEQGELV ITGNLFLGYL NQPESFYPQE VRTGDLVNLT
NAFLNINGRQ KNIIINSFGR NLSPEWVEAE LMATGYFREA LVFGEAKPYC GALLSPAAAH
ITEDQIQQVI SMVNQQLPDY ARIGTWIPLA QPLMTIPGMV TATGKPIRDN ILAHFAGQIE
PLYQDTFSQL NTAFGESL
|
|---|
| |