| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3698 |
|---|
| Symbol | |
|---|
| ID | 5366674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4172041 |
|---|
| End bp | 4173876 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640806081 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001342534 |
|---|
| Protein GI | 152997699 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.736817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG CTGATTCCCC TCAAAATACC GTCGATAAGA ACATGCTAGG CGTGTTTCGC
TATAGCCGTC GCGCCATAGA TTTAGTCTGG AAAACCTCGC CGGCATTAAC CCTAGGTTTG
GCGTTGGCAA CACTGATTGC TGGTGTCACG CCAGCCGCCA TGGCATATGT GGGACAATTG
ATCGTCGATG CCGTCGTGGC AGCGATGGAA AGCTATAAAC AAGATCAAGT TCTGCATTAT
CAAACTGCAC TCAACTATGT GGTGTTAGAG GGAATCTTGG TGTTGGTGAT TGCCGCCGCG
CAGCGTGCAT TGACCGCGCA GCAGGCCATT TTGCAAGGTT TATTAGGCCA AAAAGTCAAT
CTACTGATTC TTGAAAAAGC CCAAAGCCTA ACACTTTCGC ACTTTGAAGA CTCCGAATTC
TACGACAAGC TGGTTCGCGC TCGTCGTGAG GCCTCCAGCC GCCCGCTTGC TCTGGTGAAT
AAAACCTTTG CCTTACTGCA AAATGCTATC ACGCTGTCTA GTTTTGCAGT CTTACTCTGG
CACTTTTCTC CATGGGCGTT GGCGTTGTTG ATTTGTGGCG CTTTGCCTTC TTTTATCGCT
GAGGCCAAGT TTTCTGGTGA TGCCTTCTTG ATGTTTCGTT GGCGCTCGCC AGAAGTCCGC
CAGCAAAACT ATTTGGAAAC CTTGTTGGCT CGGGAAGACA ACATTAAAGA AGTCCGCCTG
TATCAATTGG GTGACCGCTT TTTACAACGT TACACAGAAA TATTCATCAA GCTATTCAAA
GAAAGTAAGC GACTAATTTT ACGCCGCGAA AGCTGGGGCT TCGCCCTTGG CGTTATCAGC
ACCTTGGTGT TTTATGGCGC CTATGGCTGG ATCGTCAGCG ACACCATCAT TGGCGCGATC
ACCTTGGGTC AAATGACCAT GTATTTGCTA TTATTCAAGC AAGGCCAGAG CTCGGTCTCC
GCCTCACTCA CCGCCATCAG CGGCATGTAC GAAGACAATT TGTATCTATC CAATCTCTAC
GAATATCTAG AGCAAGAAAC ACCACTTTCT ACAGCTGGTC TTTCTTCAGG TCCCATTCCA
AACGATGGCA TTCGCTTTGA AAACGTCTCT TTCCAATATC CAGGTAACGA AAGACCCGCA
CTTGCTAACA TCAACCTCCA CATTCGCCCC GGCCATAGCC TCGCGATTGT CGGTGAAAAT
GGCTCAGGCA AAACCACCCT AATCAAACTA CTCACGCGTC TTTATAACCC AACTCAAGGG
CGCATTTTAT TGGACGGTTT GGACTTGCTG GAATGGGAAG AAAGCGCGCT GCTAAAGCGT
GTTGGGGTGA TATTTCAAGA CTTTGTACGT TATCAATTTA TTGTCGGAGA AAACATCGGC
GCGGGCGACA ACGACAGATT TAACGACCAA ACGGGATGGA AAAAAGCCGC TGAGCTTGGC
AAGGCCACCG ACTTTATTGA TGAACTAGAA AGCGGCTATC AAACTCAACT GGGTCGCTGG
TTTCGAGGTG GACAAGAATT ATCAGGTGGC CAATGGCAAA AAATCGCCTT GGCGCGTGCC
TTCATGCGCG AAGACGCGGA TATTTTGGTA TTAGATGAAC CAACTGCGGC AATGGATGCT
CAGGCCGAAG CCAATATTTT CCAACACTTT CAAGAACACA CCAAGGACAA AATGGCGATA
CTTATTTCCC ATCGATTCTC TACTGTGCGT CTCGCACACG AGATCATCGT CATGGAGCAT
GGGCAAATCA AAGAGCGCGG CACCCACGAA TCGCTACTAG CTCAGCAGGG TCAATATTCA
CATTTGTTTA CCTTGCAAGC ACAGGGTTAT CGTTAA
|
|---|
| Protein sequence | MKPADSPQNT VDKNMLGVFR YSRRAIDLVW KTSPALTLGL ALATLIAGVT PAAMAYVGQL
IVDAVVAAME SYKQDQVLHY QTALNYVVLE GILVLVIAAA QRALTAQQAI LQGLLGQKVN
LLILEKAQSL TLSHFEDSEF YDKLVRARRE ASSRPLALVN KTFALLQNAI TLSSFAVLLW
HFSPWALALL ICGALPSFIA EAKFSGDAFL MFRWRSPEVR QQNYLETLLA REDNIKEVRL
YQLGDRFLQR YTEIFIKLFK ESKRLILRRE SWGFALGVIS TLVFYGAYGW IVSDTIIGAI
TLGQMTMYLL LFKQGQSSVS ASLTAISGMY EDNLYLSNLY EYLEQETPLS TAGLSSGPIP
NDGIRFENVS FQYPGNERPA LANINLHIRP GHSLAIVGEN GSGKTTLIKL LTRLYNPTQG
RILLDGLDLL EWEESALLKR VGVIFQDFVR YQFIVGENIG AGDNDRFNDQ TGWKKAAELG
KATDFIDELE SGYQTQLGRW FRGGQELSGG QWQKIALARA FMREDADILV LDEPTAAMDA
QAEANIFQHF QEHTKDKMAI LISHRFSTVR LAHEIIVMEH GQIKERGTHE SLLAQQGQYS
HLFTLQAQGY R
|
|---|
| |