| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3652 |
|---|
| Symbol | |
|---|
| ID | 5366311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4127018 |
|---|
| End bp | 4127947 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806035 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_001342488 |
|---|
| Protein GI | 152997653 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATCC AGCTGTTCCC TTTTTGGGCA TTGTTGCTGT CAGCAATTGC CTTTTTTCAA
CCGGATATAT TTGTCGGTTT AAAAACACAA ATTGTTCCAT TATTGACCAT CATTATGTTA
GCGATGGGAT TGACCTTAAG CCCAGCAGAC TTCAAACAAG TTTTGAAGAA TGGTAAAGCC
GTTGGCGTGG GTGTGTTATT GCAGTTTTTA GTCATGCCGA TTGCCGCATT CTGTGTTGCC
TTTGCATTTG GTTTTGATAC TGAGCTAACC GTTGGCATGC TGCTAGTAGG CAGTGTGGCT
GGTGGGACGT CATCAAATGT TATGTGTTAT TTGGCAAAAG GCGATACGGC GCTGTCAATT
TCTATGACGG CTATTTCGAC CTTGCTTGGC GTGATACTGA CACCATTTTT AGTGTCTCTA
ATGATTGGTC AAAGTGTTGA TGTGCCAGTG GCTGGTATGT TGCTTAGCTT ACTTAAAATT
GTATTATTAC CCGTTGCTGC GGGTGTATTG ATTAATACTT TTTTCTCGAA GTTTGTTCGC
AAGGCTGAGC CGATCTTTCC TTATATTTCG ATGTTTGCCA TCGTGCTGAT TATTGCTATT
GTTGTGGCTC TGAGCGCATC TAAAATCGTT CAAGTAGGTC TGGTTGTTGC GGCGGCTGTG
ATTCTGCATA ATGCGATTGG TTTGACCTTG GGTTACTGGG TGACTTACTT GCTTGGTTTT
GATGCACGTG TTTGTCGTAC CATTGCCTTC GAAGTCGGTC TGCAGAACTC TGGTCTAGCC
GCAGCGCTAG CGGTGAAATT CTTCACGCCA ATGGCGGCAC TGCCTGGCAC CATTTTCAGT
GTCTGGCACA ATATTTCAGG TTCCTTGTTG GCGAGCTATT GGAGCCGTCG ACCTGTTGCT
GGAAATAACG CGCAAGAAAC AGATAAATAA
|
|---|
| Protein sequence | MVIQLFPFWA LLLSAIAFFQ PDIFVGLKTQ IVPLLTIIML AMGLTLSPAD FKQVLKNGKA
VGVGVLLQFL VMPIAAFCVA FAFGFDTELT VGMLLVGSVA GGTSSNVMCY LAKGDTALSI
SMTAISTLLG VILTPFLVSL MIGQSVDVPV AGMLLSLLKI VLLPVAAGVL INTFFSKFVR
KAEPIFPYIS MFAIVLIIAI VVALSASKIV QVGLVVAAAV ILHNAIGLTL GYWVTYLLGF
DARVCRTIAF EVGLQNSGLA AALAVKFFTP MAALPGTIFS VWHNISGSLL ASYWSRRPVA
GNNAQETDK
|
|---|
| |