Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3618 |
Symbol | |
ID | 5365025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4082587 |
End bp | 4083225 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640805994 |
Product | anti-ECFsigma factor, ChrR |
Protein accession | YP_001342455 |
Protein GI | 152997620 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3806] Anti-sigma factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0730754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00137205 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTAACA TGGATTTTGC TCAGACAGTA TTCATGGATA CGGATAAAAT TAATTGGATC GCCAGTCCTA TGTCTGGTGT TTATAGAAAG CCTTTAGCAA GAGAGGGGGC TGAGCGAGGT CATGCAACGA GTCTTGTTAG ATATGAGGCT GGCTCGGTAT TTCGTCCTCA CCCACATCCT CTTGGAGAAG AAATACTGGT TTTAAATGGT GTTTTTTCGG ATGAAAAAGG TGATTTTAAA GCAGGAAGCT ATTTTAGAAA CCCTCCCGGT AGTAGTCATG CTCCTCATAG TCGTGATGGC TGTTTTTTAT TGGTCAAATT ACATCAGTTT CAAGTTTCCG ATTTAAATCA AATCTATGTA GATACTCCTA ATATCTGGTC ATCTCAAAAA TCCGAAGTTG TTCCTCTTTA CGAATTTGGC GCTGAGCGCG TTTGGTTTGT TCGTATTCAG AATGGTGAAG ATATATTAAG TGAATTGGAC TTAGCGACTT CCGTTGAGTT ATTTATTATA TCTGGGCAAG CTGAGTACGG AGCTATTCAA ATGGCTTCAG GAGCATGGCT ACGTGAGCCT AGCTTCAGAT TAGACCATTG GGTTGTGCCG TCAAATTGCT TTATTTGGTT AAAGTCAGGC CATTTCTAA
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Protein sequence | MLNMDFAQTV FMDTDKINWI ASPMSGVYRK PLAREGAERG HATSLVRYEA GSVFRPHPHP LGEEILVLNG VFSDEKGDFK AGSYFRNPPG SSHAPHSRDG CFLLVKLHQF QVSDLNQIYV DTPNIWSSQK SEVVPLYEFG AERVWFVRIQ NGEDILSELD LATSVELFII SGQAEYGAIQ MASGAWLREP SFRLDHWVVP SNCFIWLKSG HF
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