| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2965 |
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| Symbol | |
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| ID | 5368127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3349921 |
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| End bp | 3350466 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640805338 |
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| Product | Tfp pilus assembly protein FimT |
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| Protein accession | YP_001341811 |
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| Protein GI | 152996976 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.108298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC AATACGGCTT TTCTCTGCTG GAACTACTCT GTGTTCTAGC TATTTTGAGC
ATATTAGCTC ACGCAGGCTC AGCGCATTTT CTTAGCGTCA GCCAAAAAAC TAAAGATAAA
AACACCCTAA AAAATGAAAT AAAGCGCTTA GCAGATGCGC TCACACAGGC TCGACAATTG
GCGGTAATTA GCGGCCAAAC CAGTTTTGTA TGTGGTGGCT TGAATTGCGA CGGCGTTTGG
TCTTCAGGAT TTACACTTTA TCAAATTGAT CCTAATAACG GAGCTAAAAA ACGCTATCGG
CAGATTATCT TTGAGCCTTT ATTGGCAGTG TCGTGGAGTG GCTTTCCAGT TAAAAAGCAG
CAGATAGAGT TTCGATCTAA CGGATTATCT GGTTACCAAA ATGGCACCTT TGAGTTTTGT
TTGGGGGCTT GGCAAGCGGC GTTAATACTT AATCAAAGTG GACGTTTTTA TCTCACTGAT
CCACGAGGTG TTGATTCACA AGACTCCTCT TCACAAGGAA CTGTGGTGGG TATTGCGGAT
GAGTAA
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| Protein sequence | MNRQYGFSLL ELLCVLAILS ILAHAGSAHF LSVSQKTKDK NTLKNEIKRL ADALTQARQL
AVISGQTSFV CGGLNCDGVW SSGFTLYQID PNNGAKKRYR QIIFEPLLAV SWSGFPVKKQ
QIEFRSNGLS GYQNGTFEFC LGAWQAALIL NQSGRFYLTD PRGVDSQDSS SQGTVVGIAD
E
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