| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2875 |
|---|
| Symbol | |
|---|
| ID | 5364834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 3257205 |
|---|
| End bp | 3258578 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640805249 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001341722 |
|---|
| Protein GI | 152996887 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0385307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA GTAACACCAA CAATCACATT GAAATATGGC TACTTGATGA CGACGATATT
GTTCGTTCAA CCACCGCCCA ATGGCTGCGC TTATCAAACT ATAACGTACG AGAATTTCAA
GAGGCCCAAC AGCTGATAGA TCAGTTCAAA GTTGGACTAC CTTGCATTAT CGTCAGTGAT
ATTCGTATGA CGCCTATCGA CGGTTTAACA TTGATGAGCG ACTGTTTGAG TAAAGAGCAT
GAGCTTCCAT TTATACTGAT TACCGGACAT GGCGACGTCG ACACCGCCGT CAATGCTTTG
CGTGACGGCG CTTTTGATTT TCTTGAGAAA CCCTTTGACC CAAACCGGTT GTTACAAACT
GTTGAAAAAG CTGTTCAACT AAGAAAAGTT CAGCTTCAAC ATGCTAATCA ATCCCAGTAC
CTTGGCGACT TACATGGCTT AGAAGAAATC ATCATTGGTA AAAATGAGCA AATCATCCGT
GTCAGACAGC AAATTCGCAC CTTCGCCAGC ATGGACACCC ATGTCATTGT TTACGGAAAA
ACCGGCTGTG GCAAAGAGTT AGTTGCAAAA GCTTTACACG ATTGTAGTCC AAGAAGCAGC
AACCCATTTG TCGCAATTAA TTGCGCAGCT ATTCCAGCAG ACCTGTTTGA AAGCGAACTA
TTCGGCCATG AGGCTGGCGC CTTCACCAGT GCGAACAAGC AAAGGATTGG CAAGCTTGAG
CATGCCAGTG GCGGCACATT GTTTCTAGAT GAAATAGAAA GTATGCCACT CGCGATGCAA
ATTAAATTAC TACGCGTATT GCAGGAAAAT CAGCTCGAGC GAGTTGGCAG CAATAATACG
ATCAAGATAG ACCTAAGAGT TGTCGCGGCT GCAAAAAGTG ATCTACAGAC GCTAGAAAAC
TTTAGACAAG ATTTATTCTT TCGACTGAAT GTATCACAAA TACATCTTCC AGATTTACGC
AACAGAGGAT CTGATATTCC ACTGCTCTTT GAGCATTTTT GTCGAATAGC AGTAAAAGAG
CGCGGAGGAG ATCTTAGACA ACTTAGTCCA ATCGATCATG AAACGCTGAC GTTATACGGA
TGGCCAGGAA ATGTTCGTGA ACTTAGAAAC GTTGCGCTAC GCTATGCACT TGAACCTAAC
ACGAGTGTTG CAAAAATATT GGCAGGCTAC CAAGCTCAGG ATGATATAGA CACCATAACC
CCTCTGCCAC TTAGCGTGAA GGTACAAGAA TTTGAACGTA GCTTAATTGA AGCCAGTATT
CGACAACAAA AAGGCAATAT TCAACTTGTG TTAGAACAAC TCCAGCTTCC TCGCAGAACA
CTCAATCAGA AAATGCAAAA ATACGGCCTA AATCGAACCG ACTACTTAGA CTGA
|
|---|
| Protein sequence | MENSNTNNHI EIWLLDDDDI VRSTTAQWLR LSNYNVREFQ EAQQLIDQFK VGLPCIIVSD
IRMTPIDGLT LMSDCLSKEH ELPFILITGH GDVDTAVNAL RDGAFDFLEK PFDPNRLLQT
VEKAVQLRKV QLQHANQSQY LGDLHGLEEI IIGKNEQIIR VRQQIRTFAS MDTHVIVYGK
TGCGKELVAK ALHDCSPRSS NPFVAINCAA IPADLFESEL FGHEAGAFTS ANKQRIGKLE
HASGGTLFLD EIESMPLAMQ IKLLRVLQEN QLERVGSNNT IKIDLRVVAA AKSDLQTLEN
FRQDLFFRLN VSQIHLPDLR NRGSDIPLLF EHFCRIAVKE RGGDLRQLSP IDHETLTLYG
WPGNVRELRN VALRYALEPN TSVAKILAGY QAQDDIDTIT PLPLSVKVQE FERSLIEASI
RQQKGNIQLV LEQLQLPRRT LNQKMQKYGL NRTDYLD
|
|---|
| |