| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2734 |
|---|
| Symbol | |
|---|
| ID | 5366428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3093502 |
|---|
| End bp | 3096195 |
|---|
| Gene Length | 2694 bp |
|---|
| Protein Length | 897 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640805109 |
|---|
| Product | Beta-galactosidase |
|---|
| Protein accession | YP_001341582 |
|---|
| Protein GI | 152996747 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTA CAAAAATAAT TAATCGAATC GTCTTAGCTG TTGCAGTGTT TATATTTTCA
ATTTTTTCGA TAAGCGCCTC AGCTTCATCC CCTCGTGAAC AATTAATATT GGATACGGGC
TGGAAATTTC TTTTTTCTGA AGGGGATAAA ACAGATGCGT TTTTACAAAA AGATTTTGAT
GATAGTGTAT GGCAAACAAT CAGTGTTCCA CATACATGGA ACAACGTGGG TTATTACCAG
AATGACACCA CGTCTCACAT TAACACTAAA AACAATATCA ACAAGCAATA TGGTATTGGT
TGGTATCGAT TAAATTTTAA TGTTTCTTCT ACGAATGCAA AACAACAAGC ATGGTTAGAA
TTTGATGCAG CGAGCCGAGT AGCTGAAGTA TGGCTAAATG GAGTGTACCT TGGTGAGCAC
CGAGGAGGTT TTACTCGTTT TCGTTTTGAT GCGACTCAGG CTCTGTATTG GGATCAAAAC
AATGTGCTTG TTGTAAAAAC GGACAATACG AAACCCACCG CAGATTCATC AACTGCCGAT
ACTTTGCCCA TTGCTGGTGA CTTTTTTGTC CACGGTGGTC TGTATCGTCC CGTAAGGCTG
GTATTCACCG ATCCAGTACA TTTCGACATG CTGGACTATG GTGGACCTGG TGTGTATGCC
ACCACCGATT TAACTAAGGC AGAAAAAGCG CAGGTGACAG TGAGCAGCCG AGTAAAAAAT
GACGCTGAGC AGTCTAAAAA GATACGAGTT ATTTCTCAAC TTGTAGATGC CAAGGGTAAA
ACTGTGGCTC AGGCAGAACA AGCGTTAACA CTTGAACCTA AAGCATTAGC GACGTTAAAA
CAGAACTTAG ATGTCGCTAA CCCTACTTTA TGGCAAGGAC AAGAGAATCC TTATTTATAT
ACTCTGCGAA CAGAAATTCG TGGGTCAAAT AATCAGGTTC TCGATACACT CGAGCAAAAA
TATGGGTTGC GTAATATTGT GATATCTCCC GACAAAGGTT TTATTCTCAA TGGCAAGCCA
CTGCGTTTAC AGGGTGTTGC TTATCACCAA GATAAAGAGG GGCTTGGTTG GGCCGTGAGT
CCAGAGGATG TCAAACAGGA TGTGGATTTG CTGGTGGAAA TGGGGGCTAA TACATTGCGT
CTTGCTCATT ATCCTCATGG CCAGTCTGTA CATGAGTTAG CAGATAAATA CGGTTTGATT
CTTTGGGATG AAATTCCTTT AGTGACAAGT TGGACGTATG GCAAAGATCA TAAAGTGGCA
AATGACGGAT TATTGGTCAA TGCAGAGTTG CAGTTAAAAG AAATGATCAA GCAAAATTTT
AATCACGCAT CTGTCGCTTT TTGGGGAGTG GCGAATGAAG TAGATTTTGG TGCGGTCGTT
CCTGCGTTTC TGGGGGCTAC TCGAGGTAAT ACTCCTGATC CTATTCCTGT TTTGAAGTCT
CTGGCGGACA TGGTAAAACA GTTGGATCCT AGCAGAGCCT CAACCCTTGC TAATTGCTGT
GAAGCCAGAG AGGAAGTCAA AGATATCGAT ATTCCCAAAA CATCGCCAGT GGCTGATACG
GTTGGGCTTA ATCGTTATTA TGGCTGGTAT TATGGGGACG TTGATGATTT TGGGCCGCAC
TTAGATGCAT TGCATGTGCA ATATCCAAAT TTACCAATAT CGGTAAGTGA ATATGGCGCA
GGTGGCGCAG TGTCCTTACA CACAGATAAT TACTTAGGTG CTCCGGTCGA CTCTAGAGGA
CACCACCAAC CTGAAGAATA CATGTCTTAT GTGCATGAAG AGAATTGGCG TGTGATCGAG
AGTAAACCGT ACCTATTTGC TAGCTGGATC TGGAATGCAT TTGATTTTGC GACCACGGTG
CGAACAGAAG GGGATTCACA TGATATCAAC ACCAAAGGGC TGATTACCTA TGATAGAGCG
ATAAAAAAAG ACGCGTACTA CTTTTATCAA GCGAACTGGA CGACTAAGCC TATGGTGCAT
GTCACCTCAA GTCGTTACTC GCAGCGCCAC TATCAGATTA CCGACGTTAA AGTTTATTCC
AATCTTGATC AAACTGAATT GTGGTTGAAT GGTAAATCTT TAGGGGTTAA AGCCGATTGC
TCATTAAAAA TTTGCGTGTG GCCAAATGTC AGTCTTAAAG TAGGCGATAA CACGGTTGTA
GCTAAAGGCG TTGGCAAGCA ATCTTCAGTT CAGGATGAAA CGCATTGGCA GTTAAATAAA
AGCCAGAGTA ACAGCTACTT TATTGATGCT GGCGCATTAG TTGCCGCATC AACACAAGAG
CATTCTTTTG GCTCAGATAA CTTTTTTTAT GGTGGCGAAG CTGCATCGTT TGATAAATTA
GGTGGCTGGG GACGTCCGCC AGTGAAGCCC GAGATAAATC AGACTGCAGA TCGTGATTTG
GCTACTACAT ACCGTCGAGG GAGCTTTCAT TATGAGCTGC CATTAAGCAA TGGCCACTAT
AAAGTCGTCT TACTGACGGT TGCTCCTTCG GATGACATAA CGTCGCGATT TACTGTAGAA
GCAAATGGCC ACAAAATTGT TGAAGTGAAC GCGTCAAAGT CAGAATCTGG CGAAAACCTA
ATCGCTGAGT ACCATACTGC AGAAGTTGAA GTGGTAGAGG GGCTTTTAAA TCTTAAATTT
GTACCAGTTC AAGGTGATGC ATTCGTATCT GCTATCGAAG TTACGCCAAT CTAA
|
|---|
| Protein sequence | MEITKIINRI VLAVAVFIFS IFSISASASS PREQLILDTG WKFLFSEGDK TDAFLQKDFD
DSVWQTISVP HTWNNVGYYQ NDTTSHINTK NNINKQYGIG WYRLNFNVSS TNAKQQAWLE
FDAASRVAEV WLNGVYLGEH RGGFTRFRFD ATQALYWDQN NVLVVKTDNT KPTADSSTAD
TLPIAGDFFV HGGLYRPVRL VFTDPVHFDM LDYGGPGVYA TTDLTKAEKA QVTVSSRVKN
DAEQSKKIRV ISQLVDAKGK TVAQAEQALT LEPKALATLK QNLDVANPTL WQGQENPYLY
TLRTEIRGSN NQVLDTLEQK YGLRNIVISP DKGFILNGKP LRLQGVAYHQ DKEGLGWAVS
PEDVKQDVDL LVEMGANTLR LAHYPHGQSV HELADKYGLI LWDEIPLVTS WTYGKDHKVA
NDGLLVNAEL QLKEMIKQNF NHASVAFWGV ANEVDFGAVV PAFLGATRGN TPDPIPVLKS
LADMVKQLDP SRASTLANCC EAREEVKDID IPKTSPVADT VGLNRYYGWY YGDVDDFGPH
LDALHVQYPN LPISVSEYGA GGAVSLHTDN YLGAPVDSRG HHQPEEYMSY VHEENWRVIE
SKPYLFASWI WNAFDFATTV RTEGDSHDIN TKGLITYDRA IKKDAYYFYQ ANWTTKPMVH
VTSSRYSQRH YQITDVKVYS NLDQTELWLN GKSLGVKADC SLKICVWPNV SLKVGDNTVV
AKGVGKQSSV QDETHWQLNK SQSNSYFIDA GALVAASTQE HSFGSDNFFY GGEAASFDKL
GGWGRPPVKP EINQTADRDL ATTYRRGSFH YELPLSNGHY KVVLLTVAPS DDITSRFTVE
ANGHKIVEVN ASKSESGENL IAEYHTAEVE VVEGLLNLKF VPVQGDAFVS AIEVTPI
|
|---|
| |