| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2601 |
|---|
| Symbol | |
|---|
| ID | 5367139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2942472 |
|---|
| End bp | 2943083 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640804974 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001341449 |
|---|
| Protein GI | 152996614 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.512754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000366247 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGTC GTCCATCGTT AGAAACCGCC ACAGCGTCAG ATCCTGATCG GTTTGTTGAG
CCGCTAGAGC TTGGTAAGCG TGTTAAGGAA ATTCGTTTAT CGAAAGGCTG GACGCTGGAG
GAAGTAGGAA AAAGAACGGG AATAGCTCGG TCAACGTTAT CGAAAATCGA GAATGATCAA
GTTTCGCCAA GCTTCACTAT CGTGCAGAAG TTGATTAATG GTTTGGAAAT GGATTTGCCG
CAACTATTTG TTGAGGCGAG TGAGCATTCT ATTGCAGGGC GTCGTGATAT CACTCGCAAA
GGAAAAGGTG AGCCCCATCC AACGGCAACT TATGAGCATG AGTTATTAAA TTACTCGATT
AGCCGTAAAA AAATGGTGCC GTTTAAAACC ACGGTTAGGG CTCGCTCTTT TTCTGAGTTT
AAAGAATGGG TTCGTCATGA TGGCGAGGAG TTTCTGTTAG TTTTGCAAGG TAAAATTAAT
TTTTTCTCTG AGCTCTATGA GCCGATTGAA TTAAAAGAAG GTGATAGTGT GTATTATGAT
GCCACTATGG GACACGCAGT TGTCTCCTTG TCGGTAAAAG ATGCAGAAAT TCTTTGGGTC
GTTGCTCGTT AA
|
|---|
| Protein sequence | MVSRPSLETA TASDPDRFVE PLELGKRVKE IRLSKGWTLE EVGKRTGIAR STLSKIENDQ
VSPSFTIVQK LINGLEMDLP QLFVEASEHS IAGRRDITRK GKGEPHPTAT YEHELLNYSI
SRKKMVPFKT TVRARSFSEF KEWVRHDGEE FLLVLQGKIN FFSELYEPIE LKEGDSVYYD
ATMGHAVVSL SVKDAEILWV VAR
|
|---|
| |