Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2554 |
Symbol | |
ID | 5365826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 2854571 |
End bp | 2856055 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640804917 |
Product | gluconate transporter |
Protein accession | YP_001341408 |
Protein GI | 152996573 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00434171 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00292422 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTACCTA TATCTGTAAT CGGCTTAATA ATAGCTGTAT TCGTTTTAAT ATTTTTAGTA TTAAGAACAA GAGTTCACGT GTTAATTGCC ATGCTAATTG CAGCATGCAT TGCCGGTTTA ATCGGTGGGT TAAGTGTTGA TGAAACCATG TCAGCCATTA GCAAAGGATT TGGTGGAACA TTAGGCGGTA TCGGTATTGT TATCGGTTTG GGCGTCATGA TGGGGGCAAT TTTAGAAACC TCTGGTGCTG GCGAATCAAT TGCTTATCAC TTCATCAAGT GGCTAGGGAA GAAAAAAGAG GAAATGGCTT TAGCTATTAC AGGCTACATC GTCAGTATTC CTGTTTTTGT GGACAGCGCA CTGATAATTT TGTATCCGAT TGCTAAGTCT TTAGCAAAAA AATCCAATCG CTCTATCTTA ACCTTAACAG TAGCGCTTGC TGGTGGTTTG GTTGTTGCCC ATCACTGTAT TCCACCAACA CCTGGTCCAT TGGGTGTAGC AAGTATCTTT AATGTTGACT TGGCCTCTAT GCTTGGTTTT GGTCTGTTAA TCGCCATTCC TTGTGTATAC GGTATTGTTT TGTATGCTCG CTGGTTGGAA AAGCACTTCC CTGAATTTTC AGTTTCACCA ACTTTAGCCG CTGATGACGA TCTTAAGAAA ATCCATGATG ATTACATGGC TTCTAAGGAG TCTAAAGAAC TTCCTTCGCT GATTAAATCA ATCATGCCGA TTGTGGTTCC AATCGTCCTA ATTTTGATTA AGTCGCTTAT GAGTCTTGCC GAGAAACAAT TTGGTATGGA AGGCTTATCT ACTAGCATCG TTGGTGTTGC TTTTAACTTC CTTGGTAATC CTATTATCGC GCTTTCAATC AGTACATTAC TTGCTGTGTA TACGCTAACG CCTTATTTGG ATAAAGAGAC AACAACCCGG AAACTAGAAG AAGGCATATC TACTTGTGGC ATCATTCTTT TGGTAACAGG CGCAGGTGGT GCATTAGGCA GCGTATTACG TGAATCTGGC GCAGGTGCAG AAATTGCTAA CCAAATTGTT GCTCTTTCTA TATCGCCAAT CATGATCCCA TTCATTATTG CGACCTTAGT TAGAATCATC CAAGGAAGCG GCACGGTTTC AATGATTACT GCAGCCTCTA TCTCAGCGCC AGTACTAGCA GAAATGCAAG GCGTTAACAT GCTGTTTGCT GCGTCTGCCG CAACTATGGG GAGTTTGTTC GCTGGTTACT TTAATGACAG CCTATTCCAC ATTGTTAACC GTTTAATGGG CGTTACTGAA GTGAAAAAAC AGTTGGTGAT CTGGACTGTT CCAACAACAA TAGCTTGGGC TATTGGTGGA TCACTTATCA TGATCCTGAA CCTAATATTC GGCAGCCTAG GCAGCATCTA CGATCCTGTA CTACCCTTAC TCGTATTAGC TGGCTGTATC TTGTTTGTGA AAAGCCAAAG CAAGCCACAA ATCAAAACAG CTTAA
|
Protein sequence | MLPISVIGLI IAVFVLIFLV LRTRVHVLIA MLIAACIAGL IGGLSVDETM SAISKGFGGT LGGIGIVIGL GVMMGAILET SGAGESIAYH FIKWLGKKKE EMALAITGYI VSIPVFVDSA LIILYPIAKS LAKKSNRSIL TLTVALAGGL VVAHHCIPPT PGPLGVASIF NVDLASMLGF GLLIAIPCVY GIVLYARWLE KHFPEFSVSP TLAADDDLKK IHDDYMASKE SKELPSLIKS IMPIVVPIVL ILIKSLMSLA EKQFGMEGLS TSIVGVAFNF LGNPIIALSI STLLAVYTLT PYLDKETTTR KLEEGISTCG IILLVTGAGG ALGSVLRESG AGAEIANQIV ALSISPIMIP FIIATLVRII QGSGTVSMIT AASISAPVLA EMQGVNMLFA ASAATMGSLF AGYFNDSLFH IVNRLMGVTE VKKQLVIWTV PTTIAWAIGG SLIMILNLIF GSLGSIYDPV LPLLVLAGCI LFVKSQSKPQ IKTA
|
| |