| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2369 |
|---|
| Symbol | |
|---|
| ID | 5367766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2676406 |
|---|
| End bp | 2677245 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640804733 |
|---|
| Product | DNA ligase |
|---|
| Protein accession | YP_001341226 |
|---|
| Protein GI | 152996391 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1793] ATP-dependent DNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.815308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAAA TAAAATGTTT GGCCGTATGG CTATGCTTGC TTCCCTTATT TCTTTTTGCG
CAACCTGATG TGCAATTGGC CAATGTGTTT TCCGAAGATG TTCATGTAAA AGAGTATCTT
ATTAGTGAAA AATACGATGG AATCCGTGCT ATCTGGACGG GTGAGAAGTT AGTGACTCGT
CAAGGAAATC CAATTTTTGC TCCAAAATGG TTCACTGACA AATTGCCACG AGTTTGGCTC
GATGGAGAGC TTTGGTCTAC GCATAATGAT TTTTCTTTTA TCATGTCGAC TGTGAGGAAA
CAGACTCCAA TAGATAGTGA ATGGCGTAAG ATTTACTACA TGGTGTTTGA TGCACCAGAC
AGAGAAAGAA ACATGATCTT TGAAGAAAGG TATAAGCGTT ATACTCGTTT GTTAACGATT
CTAGATATCC CCCACGTTCG ACCTGTAGAA CAATTCTCTG TTCATAATAA CGAGGCGCTT
CACAGCATGT TAGCTGCGTA TGTAAATAAA GGCGCAGAAG GCTTGATGCT GCATAGGAAG
CTTGCCCGTT TTGAAAGGGG GCGTACCGAT AACTTGCTCA AGTTGAAGCC TCACATGGAG
GCCGATGCGC AAGTTATTGA GGTTCTGAAT GGTTCAGGTA AATACGATGG CATGATGGGA
TCTGTTTTAG TGGAAATGCC ATCTGGTATT CGCTTTAAAA TAGGCAGTGG CTTTTCAGAC
GATGAGCGCA ACACTCCTCC AAATATAGGT GATCATGTTA TTTATAAATA TCATGGGTTT
ACTGAGCGAG GTATTCCTAG GTTTGCAAGT TTTCTAAGAT TGCGTGATAC ACGATATTAA
|
|---|
| Protein sequence | MFQIKCLAVW LCLLPLFLFA QPDVQLANVF SEDVHVKEYL ISEKYDGIRA IWTGEKLVTR
QGNPIFAPKW FTDKLPRVWL DGELWSTHND FSFIMSTVRK QTPIDSEWRK IYYMVFDAPD
RERNMIFEER YKRYTRLLTI LDIPHVRPVE QFSVHNNEAL HSMLAAYVNK GAEGLMLHRK
LARFERGRTD NLLKLKPHME ADAQVIEVLN GSGKYDGMMG SVLVEMPSGI RFKIGSGFSD
DERNTPPNIG DHVIYKYHGF TERGIPRFAS FLRLRDTRY
|
|---|
| |