Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2089 |
Symbol | |
ID | 5368394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 2365152 |
End bp | 2366312 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640804434 |
Product | major facilitator transporter |
Protein accession | YP_001340946 |
Protein GI | 152996111 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.30932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTCTG AAAATGCTCG CCCTGTGGCT TGGCCTTTAT TTTTCTTTTA CTTTTTTTTC TGTGCCGTTG TTGGCGTTAT GATGCCTTAT ATTTCGATGT ATTATAAATC GATTGGCTTA ACTGCTTCCG AGATTGGTCG ATTGATGTCT ACCTTTACTT TGTCAGGTAT TTTGGTGCCG CATTTTTGGG GGTGGTTAAC AGCGAAAGTT GGTTTGCCAA AACGTATACT TCAATTAGCT ATATTAGGTT GTTTCATTGC TGTCATTCCG TTTAATTGGA GTGACCAATT TGAAACCTTG TGGCTATTGA CCTGTACTAT GGCGTTGTTT TATTCGTCAC TCATTCCAAT GACTGACTCT TTGACTGTAC GGAGTATACG GCAATTAGAT GTTCCCTATA CTCGTTTAAG AGCAGGTGGC TCAATTGGTT ATGTGTTTGC TGTAACTGGT GCTGGCTTTT TAATCGGGCA ATTTGGCACC GTGGTCGTCA TACCTACTAT GTGTGCATTT ATGGCACTTG CAGTTGTGAC GTCTTTTTTT CTCAAAGAAC AGGCCTATGA GATAAATCAA CAAAAGGCCA CAACTTCTTT TTTTGCATTA GTGAAAAATC CAGAATCATT GCTGTTTTTT GTCCTAGCAT TTTTGGCTTT TATGTCCCAT GCACCTTTTA ATGTTTTCTT CGCTGTGCAC CTGTCGAACT TTGGTTACAG CGGGGAAGAA ATTGGATTGC TAATGGCGTT GGGCGTGGTG ATTGAAATTT TCTTGTTCTT ATTTTTTGGG AACACGATTA AGCGTTTTGA TGTAGTCCAT ATTATTACGC TTTGTTTTAT TTGCGGTATT GTTCGTTGGC TATTAGTTGG CTGGTTTGCC TCAATTGCAT GGGTGCTTAT TTTTACGCAG TTACTCCATT CTATAACGTT TGCTTTATTT CATATGGTTT CCATTGAGCA AATTAGACGT CTTTTTCCAG AGCGTTATGC GGGTCAAGGT CAAGCAATGT ACAGTGCTTT TGCGATCGGT TTAGGTGGTG GGCTAGGAAT GGTGATTACT GGTTATCTTT GGGAATGGTT GGGTGGAGCT TGGGTGTTTA CTCTAGCTGC TTGTGTTAGT TCGCTGGCAC TTACAATACT CCTTATTAGT CAGCGCCGTT GGTTTTCCTA A
|
Protein sequence | MFSENARPVA WPLFFFYFFF CAVVGVMMPY ISMYYKSIGL TASEIGRLMS TFTLSGILVP HFWGWLTAKV GLPKRILQLA ILGCFIAVIP FNWSDQFETL WLLTCTMALF YSSLIPMTDS LTVRSIRQLD VPYTRLRAGG SIGYVFAVTG AGFLIGQFGT VVVIPTMCAF MALAVVTSFF LKEQAYEINQ QKATTSFFAL VKNPESLLFF VLAFLAFMSH APFNVFFAVH LSNFGYSGEE IGLLMALGVV IEIFLFLFFG NTIKRFDVVH IITLCFICGI VRWLLVGWFA SIAWVLIFTQ LLHSITFALF HMVSIEQIRR LFPERYAGQG QAMYSAFAIG LGGGLGMVIT GYLWEWLGGA WVFTLAACVS SLALTILLIS QRRWFS
|
| |