| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1837 |
|---|
| Symbol | |
|---|
| ID | 5364678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2065057 |
|---|
| End bp | 2066436 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640804178 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001340696 |
|---|
| Protein GI | 152995861 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0833] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.367769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.550794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA ATAATAAATC TAATGAAGCT TATCTATCCG GTACCAAAAA ACTCGGCTTA
ATAAGTATGA TGGGCATCTG CATTGGGCTA GTAATAGCTC AAGGCGGTAT GATCTCTGGT
TTACAGGGCA TTGGTATTGG TGGAACAACT TTTGTCGCCG CATTGTTTGC AGCATTTTTG
ATTGCACAGT TTAACGCTAT GAGCTTTGCG GAATTGTCCT TAATGTTTCC TCAAGAAGGT
ACCCTTGCGA CCTATACCCA AAAAGCCATA GGTCACTTCC CTGCTATCGT CGCGGTGTTT
TCCGGATATG TCATCGTGGC CACACTAGCT GTGCCTGTGG AGTTATTCCT CGTTGATGCC
ATGCTAGGAC AATTATTCCC GAGTGGATAC ATAGAAAAAT CCGCGCCTAT ACTCATCCTA
GTGATACTGA CCATTACTAA CTTGGTAGGT GCAGATGTAT TCTCCCGTGT ACAAAACCTA
CTAGCTTTCG CCCTAATCAG TGCGCTTATT ATTCTTGGTC TTGCTGCCGT AACTGGCGCA
AGTGAACCGC ACCCTGAACT TACTGGCGGA ACAGTAGACT GGGGAATGGG CGGCGTCATG
AATGGTAGCT TTATTGGACT AATCGCTCTG GCGATGTGGC TAATGGTGGG CGTTGAATTC
ATTTGCCCAA TGGTCAATGA AGTTAAAAAC CCAGAAAAAA ATATTCCCCG CGCTATGCAC
TGGTCACTAT TGTTAATTTT GGCAGTATTC TTACTGTTCA TCTATGGCGC AAGTCTATAC
ATGGACGCTG CGGCACTGAC CTCTTCACCA ATTCCATACC TAGACTATGC TCAAGCCGTA
TTTGGAAAAA GTGGATTATT GATCGCGACT ATCATTGGTT TAACTGCCGC CTGTAGTTCA
GTAAACACTT TGCTTGCTGC TATTCCAAGA ATGCTTCACG GTATGGCGAT GCAAAAGCAG
GTATTTCCAC AACTGAAATC TCTTAACCGA TACAACACAC CTTGGGTTGG CATCATCATG
CTGGCTGTAT TCATGGCGAT CCCATACTTG GTATTCAGCA TTGATTACCT AATCACCTTA
GTGATTGCGG CAACAACAAG CTGGTTACTG GCTTACATCG TGGCGCATAT TAACGTCATG
GTACTTCGAC ATCGTTATCC AGATTTTAAA CGCCCTTACA AAACACCTTT CTACCCATTG
CCACAGATCA TCGGCATTAT CGCCATGATT TATGTTGCTC TAAACAACTC ACCTTCCCCA
GAAATGACAA ATACTGTCTT TTCTATTACA GGTAGCATGC TGTTAGTGGT AGGCGTCATT
GCCGCCTTAT GGGTAAAACT GTACATGAAA CGTGGTTTGT TTACGCCAGA TATGGATTAA
|
|---|
| Protein sequence | MSENNKSNEA YLSGTKKLGL ISMMGICIGL VIAQGGMISG LQGIGIGGTT FVAALFAAFL
IAQFNAMSFA ELSLMFPQEG TLATYTQKAI GHFPAIVAVF SGYVIVATLA VPVELFLVDA
MLGQLFPSGY IEKSAPILIL VILTITNLVG ADVFSRVQNL LAFALISALI ILGLAAVTGA
SEPHPELTGG TVDWGMGGVM NGSFIGLIAL AMWLMVGVEF ICPMVNEVKN PEKNIPRAMH
WSLLLILAVF LLFIYGASLY MDAAALTSSP IPYLDYAQAV FGKSGLLIAT IIGLTAACSS
VNTLLAAIPR MLHGMAMQKQ VFPQLKSLNR YNTPWVGIIM LAVFMAIPYL VFSIDYLITL
VIAATTSWLL AYIVAHINVM VLRHRYPDFK RPYKTPFYPL PQIIGIIAMI YVALNNSPSP
EMTNTVFSIT GSMLLVVGVI AALWVKLYMK RGLFTPDMD
|
|---|
| |