| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1662 |
|---|
| Symbol | |
|---|
| ID | 5367575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1867891 |
|---|
| End bp | 1869147 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640804003 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001340523 |
|---|
| Protein GI | 152995688 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.361233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGCG AGAACGGTTT CTACGGGCAA TACGGCGGTA GCTATATTCC TGAAATCCTT
TATTCGAGCC AACAGCAAAT TTTACATGCG TTCGAAGAAG CCAAAAACGA TCCAGAATTT
CTCGCTGAGC TGAATAAACA ATGGCAGCAG TTCTCTGGCC GCCCAACGCC GCTGACTTTT
TGTGCGAATT TGACCGAACA CTTTGGCGGT GCGCAAATCT ATCTAAAGCG TGAAGATTTA
AACCACAGTG GCGCGCACAA GATGAACAAC GTGATTGGCC AAGGTTTATT GGTCAAACGC
ATGGGCAAAA AACGTGTTAT CGCCGAAACA GGCGCAGGAC AACATGGTAT TGCCACCGCT
TTGGTTGCGG CACGATTAGG ACTGGAGTGC ACGATTTACA TGGGCGCGAA AGACATTGAA
CGCCAATATC CAAATGTATT CTGGATGAAA CAACTTGGCG CAACCGTAGT GCCTGTTACC
ACAGGCGCAC AAACATTACG TGATGCACTA GACGAAGCAT TGCGCGATTG GTCTTCTAGT
CATGAAGAAA GCCATTATTT GATTGGTACA TCTTGTGGCT GCGCCCCTTT CCCTGAAATG
GTCGCATTCT TCCAATCCGT TATTGGTAAC GAAGTACGCG AGCAAAGTGT GGCACAGTTT
GGTCAATTTC CAGACCGTTT ATACGCTTGT GTTGGCGGTG GTTCGAATGC TTGTGGTTTG
TTCCTACCTT TCCTCGATGA TAAAGAAGTG GAAATGGTCG GCGTCGAAGC TGGCGGTAAA
GGTTTGGAGC TTGGCGAACA CTCTATTCGT TTGTCTCACA ATCTTGGACA GCCTGGTATC
GCCCAAGGCT TTGCTACCAT GTTCTTGCAA GACAATGCCG GACAGCTACA AGAAACCCAC
TCAATCGCAG CAGGCTTAGA CTATGTTGGC GTCTCTCCTA TCATTGCCCA TTTGGCCGAA
ACAGGTCGAA TTAACATGAC CTATGCCATG GACGATGAAG TAATTGCCGC TTGCACTCTT
CTACTGAAAA AAGAGGGTAT CATTCCAGCA CTTGAATCTT CTCATGCACT AGCGGGCGCT
TTTAAAGATG CACCGAACTT ACCTAAAGAC TCAAAGATCG TTATCAATCT TTCTGGTCGA
GGTGACAAGG ATATCTTTAA CGTGGCAAAA GCGGTGGAAG ACGAAACCTT CCCACAATTT
TTAACCGATT ACCTAGCCTC TTACCCAACC ACTCAAAACA AAGGGGATAA AGCATGA
|
|---|
| Protein sequence | MQSENGFYGQ YGGSYIPEIL YSSQQQILHA FEEAKNDPEF LAELNKQWQQ FSGRPTPLTF
CANLTEHFGG AQIYLKREDL NHSGAHKMNN VIGQGLLVKR MGKKRVIAET GAGQHGIATA
LVAARLGLEC TIYMGAKDIE RQYPNVFWMK QLGATVVPVT TGAQTLRDAL DEALRDWSSS
HEESHYLIGT SCGCAPFPEM VAFFQSVIGN EVREQSVAQF GQFPDRLYAC VGGGSNACGL
FLPFLDDKEV EMVGVEAGGK GLELGEHSIR LSHNLGQPGI AQGFATMFLQ DNAGQLQETH
SIAAGLDYVG VSPIIAHLAE TGRINMTYAM DDEVIAACTL LLKKEGIIPA LESSHALAGA
FKDAPNLPKD SKIVINLSGR GDKDIFNVAK AVEDETFPQF LTDYLASYPT TQNKGDKA
|
|---|
| |