| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1613 |
|---|
| Symbol | |
|---|
| ID | 5364856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1806043 |
|---|
| End bp | 1806942 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640803956 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001340476 |
|---|
| Protein GI | 152995641 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0246689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTTAT CGAACAGAGC GGAAATATTA GAAGAAGAAA GCCGCATATT TGCTCATTCT
GTGACTCAGT GTGATTTACA CCATCATGAT GCCCATGAAT GCTTATGGGT GGTAAAAGGT
CGAATTCGAG TTCAGGTGAT GGATGAAATA CTGCTTTTAC AGGAAGGCGA TGTTTTATTT
ATTAATAAAG AATTGCCTCA CGCCACTCAA TCTACCGGGG ATGATAATTT AGTGCTTTGT
CTACAGCATA ACTTTGCTGG AGTGGCTCTG GATACTTGCC CAATGAAAGC ATGGAGTTTG
GTTCAGAAAA ATATGCTGCC AACGATTAAG CGGCTGATGG CGCATTTGTG GTGGGAGCAC
TACTACAAGG CGGATCATTG GCAACAGGCA CAAACAAGTT TACTTGCTCA ATTTGGCTTG
CTGTTTGCTC GTTACTTTCC TTCGACTAAT GCAATTAGAG AGGACTCTCT TGAATCTACT
TTATTGATGA ATGACCTGTT GCGTCAGATT ACATTGCGTT ACCAAGAGCA TCTCTCTCTG
TCCTTGTTAG CAGAGGAGCG AGGTTTGTCG GAAGCCTATT TAAGCCGGTA TTTTAAAGCC
AAAGTAGGCG AGACTTTTCT ACGCTATTTG ACCCTTTATC GATTAGAAAA AAGTTTGTCA
GATTTGGCAC AGAAACCTAA AAAAGCCGTA TCAGAGATCG CTTTTGATCA TGGTTTTCCT
TCTGTAAAAG CCTTTAATAT GGCATTTCGC CGAGAATATG ACTGTACGCC AACGGAGTTT
CGTCTTAAGC GGGAGTCGGT AAGTTTAGTG AGTGTGGGGC AAGCCTATGC GGGAGTAGAT
GTAGTACTTT TGAAACAACG AATTATGCCG TGGTTGGATA GGCAGTTTTT GTATCTTTAG
|
|---|
| Protein sequence | MYLSNRAEIL EEESRIFAHS VTQCDLHHHD AHECLWVVKG RIRVQVMDEI LLLQEGDVLF
INKELPHATQ STGDDNLVLC LQHNFAGVAL DTCPMKAWSL VQKNMLPTIK RLMAHLWWEH
YYKADHWQQA QTSLLAQFGL LFARYFPSTN AIREDSLEST LLMNDLLRQI TLRYQEHLSL
SLLAEERGLS EAYLSRYFKA KVGETFLRYL TLYRLEKSLS DLAQKPKKAV SEIAFDHGFP
SVKAFNMAFR REYDCTPTEF RLKRESVSLV SVGQAYAGVD VVLLKQRIMP WLDRQFLYL
|
|---|
| |