Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1484 |
Symbol | |
ID | 5365742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1665019 |
End bp | 1666239 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640803828 |
Product | major facilitator transporter |
Protein accession | YP_001340348 |
Protein GI | 152995513 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.178978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0348378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCACAAAA CATTTCGCTC ATTGAGCAAC CCGCAATATC GGCTTTGGGC AATGGGAGCT TTTGTCTCAA ATATTGGCAC ATGGCTGCAA CGTACTGCGC AAGATTGGAT TGTGATTGCA GAACTGTCTA ACGGAAACGC CACAGCAGTA GGTATTGTTG TCGCTCTGCA ATTTGCTCCG CAATTTATTT TCTTACCTAT CATTGGTTGG GCTGCTGATT ACTTCGATCG CCGCAAACTA CTTATCGTCA CACAAAGCTT GCGCGGTTTG CTCGCGCTGG TTCAAGCCAT CATGATTCTG AATGGTCACC TTGAGCTGTG GCACATGTAT ATTTTCGCCT TTTTACTCGG CTGCTTTACC GCATTCGACA CTCCAGCGAG ACACGCATTC GTAGCCGATT TAGTTGCTGA TAAAGATCTA GCTAACGCCG TTTCTTTGAA TTCTATTTCA TTTAATAGCG CTCGGATGAT TGGTCCTGCT ATCGCAGGAT TTTTAATTCT ATTAATGGGT GCTGGCTGGG TGTTTGCGCT AAATGCCTTG TCCTTTATTC CAATTATAGC CATCACTTAT ATGATAAAGG CCAAACCAGT CAATTCACTT CCAAGCGTCG AAAGTGATTC TAGCAAATCT AGTAAAGCCA ACTTATTTGA TGGATTTCAT TATATTCGTC AACGTCCAGA CATGATCATT GCCATCACCA TGTTCTTTTT CTTCGCTATG TTTGGGCTAA ACTTCACCGT CTATCTGACG TCAATGACCG TTCATGTGTT TACTGGTAAC TCTCAGCAAT TTGGCATTCT GATGTCTATT ATGGCAGTAG GTTCTATTGT CGGCGCCATG ATTACCGCTA ACCGAGAAAA ACCTAATCTT CATTTTATAT CCTTTTCAGC TATCGGCTTT GGGGGAATTG CCTTGATAGC CTCGATCATT CCTAATTTTT GGTTATTTGC TGTTTCACTC AGTTTAATAG GCATGACTAC TCAACTTTTT ACCACATCCG TACACAGCCT AATTCAACTC AGTGCACAAA AATACATACG CGGTCGAGTC ATTGCTATTT TGTTAGCAAC CTCTGTGGGA GGTTCGGCAA TTGGTGGGCC TTTGGTCGGT TGGACTGCCG ACTTACTCGG TGCTCGTTGG GCTATCGCCT GTGGAGGCAT TATTGCTTTG CTAACCGCTG CACTTGGCTT ACGCTATTTA CATCAAAGAG GTGATAAATA A
|
Protein sequence | MHKTFRSLSN PQYRLWAMGA FVSNIGTWLQ RTAQDWIVIA ELSNGNATAV GIVVALQFAP QFIFLPIIGW AADYFDRRKL LIVTQSLRGL LALVQAIMIL NGHLELWHMY IFAFLLGCFT AFDTPARHAF VADLVADKDL ANAVSLNSIS FNSARMIGPA IAGFLILLMG AGWVFALNAL SFIPIIAITY MIKAKPVNSL PSVESDSSKS SKANLFDGFH YIRQRPDMII AITMFFFFAM FGLNFTVYLT SMTVHVFTGN SQQFGILMSI MAVGSIVGAM ITANREKPNL HFISFSAIGF GGIALIASII PNFWLFAVSL SLIGMTTQLF TTSVHSLIQL SAQKYIRGRV IAILLATSVG GSAIGGPLVG WTADLLGARW AIACGGIIAL LTAALGLRYL HQRGDK
|
| |