Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0882 |
Symbol | |
ID | 5365768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 973408 |
End bp | 974646 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640803216 |
Product | extracellular solute-binding protein |
Protein accession | YP_001339749 |
Protein GI | 152994914 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.297168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.673205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGTA AAAAACTGTT CGCTGCCACA ATAGGGGCAG GTTTTATGAG TGCATCGGTG CAAGCAGCTG ATGTGGAAGT GATTCATTGG TGGACATCAG GTGGTGAGCA AAAAGCCGTT ACTGTGTTAG CTGAAGAATA TAACAAACTC GGTAACGATA AATGGGTCGA TACGGCTGTT GCATTGGGCG AAAATGCACG ATCACTTACT ATGCAGCGTA TTCTTGGTGG TGATGCACCT GGTGCCGCAC AATTCAATAC CTCTCGTCAG TTCGAAGAAT TGATTGAAGA AGGTCTTCTC CTTGATCTCA CCCCGGTTGC GGAAAAAGAA GGCTGGAAGA ATTTTATTCG TCCTTCCAGT ATTTTAAACC CCTGTATGAA AGATGGCGGC ATTTATTGTG TGCCCGTCAA TATTCACTCT AATCAATGGC TTTGGACGAA TAAGAAAGTC TTTGCTGATG TGGGAGTGAA AGAGCCGCAT ACATGGGAAG AGTTTTTAAC GGTTGCCCCT AAGATCCAAG CGGCAGGCTA TATTCCTTTG GCATTTGGTG GACAAGGTTG GCAAGAGCGC CATGTTTTTG ATGTGGTGAT GATTGGTATG ACAGACGAAA AATTCTGGAA TAGTGTATGG AAAGATAAGG ACCCCAAGGC TGCTAGCAGC GATAAAATGC GTAAAGTCTT CGAAACGTTT GGTGCGTTAC GCCAGTTTAC GGATGCAGGT GCACCTGGTC GAAACTGGAA TGATGCCACT AACATGGTTA TCACTGGCAA AGCCGCTGCA CAAGTAATGG GTGACTGGGC TCGTGGTGAG TTTGCTGCGG CAGGAAAAGT CGCCGAAGTG GATTACGGTT GTATTCCGGG ACCCGCAAAA CGTCCTTCTC TTACTCTTGG GGGTGATGCA TTTATCTTCC CTAAATCCTC TGATAAAAAC CTTGAAGCGG CACAAATGAA GTTAGCTTCT ATGATGTTGA GTCCAACTAT TCAAGCAAAA TTTAATAATA CTAAAGGCTC CTTGCCTGTG CGCGCGGATG TCGATTTAGA TGTAGCCGAT GCATGTATGA AAAAAGGTCT CGCTTTGTTG GATGACCCCA AAGCTACTAT CACACCTGCA AATAATTACA TTACGGAAGA TACGAATGGG CAGGTTCAAG ATCTAGTTTC TACTTTCTGG AATGAACCAA GTATGTCTGT TGACACTGCG CTTAGCATTT TCAAAGGCAT CATCGAAGAC GCTGAGTAA
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Protein sequence | MMGKKLFAAT IGAGFMSASV QAADVEVIHW WTSGGEQKAV TVLAEEYNKL GNDKWVDTAV ALGENARSLT MQRILGGDAP GAAQFNTSRQ FEELIEEGLL LDLTPVAEKE GWKNFIRPSS ILNPCMKDGG IYCVPVNIHS NQWLWTNKKV FADVGVKEPH TWEEFLTVAP KIQAAGYIPL AFGGQGWQER HVFDVVMIGM TDEKFWNSVW KDKDPKAASS DKMRKVFETF GALRQFTDAG APGRNWNDAT NMVITGKAAA QVMGDWARGE FAAAGKVAEV DYGCIPGPAK RPSLTLGGDA FIFPKSSDKN LEAAQMKLAS MMLSPTIQAK FNNTKGSLPV RADVDLDVAD ACMKKGLALL DDPKATITPA NNYITEDTNG QVQDLVSTFW NEPSMSVDTA LSIFKGIIED AE
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