| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0850 |
|---|
| Symbol | |
|---|
| ID | 5367816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 935769 |
|---|
| End bp | 937088 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640803184 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_001339717 |
|---|
| Protein GI | 152994882 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.313022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGA CTATGACATT GGAGTTGTCT ATTAGCGTTG TCGATACCAT TATGTTGGGC
CATTACAGTG CGTTGCATTT GGCTGCTGTT GGTTTGGCAT CGAGTTTATG GCTACCGGTT
GGATGTTTCT TGATTGGTGT GACATTCGGG CTAACGCCTT TGGTGACGCG TCATTTGCAT
GGTCGACAAC CAAAATTGGT TAATCTGTAT ATGTCGCAAG CGGTTGGCTT GTCTGTTGGA
CTTGGTTTAT TGGCAAGCTT GGTAGCTATC TTCTTACTGC CATATTTCGC CGGTTTGATG
GCGACGGAAG AAGAAACAAG GCAAGTTTCT ATCTCGTATT TATATATCTT TGCGCCAGCT
CTTCCAATGT TGGCTTTGAT GACGGCGTAT AAAAACTTGT TTGAGGCGGC TGGTCGTCCA
GGTTTTCCGC TGTTTGTCGC TAGCTTTGGT CTGGTGCTGA ATGTATTGTT TAACTATGTG
CTGATTTTTG GCAAGTTTGG TTTTCCTGAA ATGGGGGCAA AAGGTGCGGC GTTGGCTTCT
GCTTTGTCTT TGTATCTAGC GGTAACCCTA TTTTTTGTTT ATGACCGCTT TATCAATAAA
ACTCCGTTAT TTACTCGCCT TGTGTGGCGT TACACACGTA AGTTTTCGAT ACTTCTTAAT
ATTGGTGCGC CAGCAGGTTT TGCCTTTGCT TTTGAGGTGG GCTTGTTTTC ATCTATGACG
TGGCTGATTT CATCTTTTGG TGATCTGGCA TTGGGCGGCG GTCAGATCGT TATGTCTTAC
ACTTCTTTCT TGTTTACACC AATGATGGCC ATGAGTGCTG TGACGGCGAT AGTGGTAGCA
AAAGCCATGT CGAAAGAAGG CGTTAGCGGC GTTAGAAAGC GTATTCGTGT GATCGTGTTG
CTAGGCCTTT CTTATGTAAG TACGTGTTTT ATTATTACTC AGGTCTTTCA TAATCAGATT
CCTTATATTT ACAGCAATAA TGCTGAAGTT GTGGCCTTGG CTGCGAGCAT TCTGTTGATC
TCTTCTTGTT ATCAATTCCC CGATATGCTG CAAACTGTAT TTACTGGCGC CTTACGAGGA
TTTCGTGATA CGCGTTCAAC CATGATCGCC TTTGCTGCGT CTTTGTTTGG TTTAAGTATT
CCGTTTGGAT TTTGGTTGTC TCATTACAGC CCCTGGGCAG AAACTTTATC TCTGCGAGGT
TTTTACATTG GTCTAGGTGC AGGGTTGACC TTGTTAGCGG TAATTTTGAT CGTGCGCTTT
CGTGTGATAT TAGCGCGTTA TGAAGGTCGA CGTATTGCCT CACCAAGAGA AGTGGCGTAG
|
|---|
| Protein sequence | MILTMTLELS ISVVDTIMLG HYSALHLAAV GLASSLWLPV GCFLIGVTFG LTPLVTRHLH
GRQPKLVNLY MSQAVGLSVG LGLLASLVAI FLLPYFAGLM ATEEETRQVS ISYLYIFAPA
LPMLALMTAY KNLFEAAGRP GFPLFVASFG LVLNVLFNYV LIFGKFGFPE MGAKGAALAS
ALSLYLAVTL FFVYDRFINK TPLFTRLVWR YTRKFSILLN IGAPAGFAFA FEVGLFSSMT
WLISSFGDLA LGGGQIVMSY TSFLFTPMMA MSAVTAIVVA KAMSKEGVSG VRKRIRVIVL
LGLSYVSTCF IITQVFHNQI PYIYSNNAEV VALAASILLI SSCYQFPDML QTVFTGALRG
FRDTRSTMIA FAASLFGLSI PFGFWLSHYS PWAETLSLRG FYIGLGAGLT LLAVILIVRF
RVILARYEGR RIASPREVA
|
|---|
| |