| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0769 |
|---|
| Symbol | |
|---|
| ID | 5368961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 832330 |
|---|
| End bp | 833250 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640803105 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001339638 |
|---|
| Protein GI | 152994803 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGCCC CGAGAGTAAC GTTAGAGCAA TGGCGCGTTT TGCAATCTGT TGTGGACAAA
GGTGGTTTTG CTCAAGCCGC GGAAGCACTT CATAAAAGCC AATCTTCAGT TAGCTATACA
GTCGCAAAGC TTCAAGAGCA GCTAGGCTAT CCGTTGCTGA TTATCGAAGG GCGAAAAGCC
AAACTTACTG AGCGCGGTGA AGTCTTGTTA CGTCGTTCAC GGCATTTATT AAAAGAAGCA
GTAGATCTAG AAGAGCTAGC TCACACACTT GGCCAAGGTT GGGAGCCTGA ATTAGAATTA
GTGGTCGATC AGGCCTTTCC AACGCCCGCT TTACTGCGTG CCTTGCAAGC TTTTGAGCCA
CAAAGCCAAG GAACACAAGT TCAACTAAAA GAAGCGGTAT TAAGCGGCGG CGAAGAAGCG
CTACGAAAAG GCAGTCCAGA CTTAGTGCTT AGCGCTATTG TTCCAAAAGG TTATTTAGCT
GATCCCATTG TCGAAGTGGA AATGATAGCG GTTGCGGCTA CGAGCCATCC TCTGCATCAA
GAAGTAGCCC CTATTAACAA CGAGCGCTTG AGTCGGGAAT TACAAATAGT TATTCGCGAT
TCGGCATTAG AAACCTCTAT AGATTCTGGT TGGTTGGGAA CCGATCGGCG CTGGACGGTA
TCTAGCGTGC AATCCGCGCT GGAGATTGTC ATCAGTGGCA TTGGCTTCGC ATGGTTACCA
AAGGCTGATT TGGAATACGC CTTGCAAAGT GGGAAACTTA AAAAATTAAA ATTGATTTCT
GGTAGTGAGC GCAATTTCCA CATGTATGCC ATCTTTGGTA AGGGCGAAAG AACAGGTCCA
GCTACTAGGC TTCTAGTAGA GCTCCTTCAG GCGGAGTGCA ATGCTTGCCC TAAACGTTCC
ACCATTCCAT CATTACCTTA A
|
|---|
| Protein sequence | MKAPRVTLEQ WRVLQSVVDK GGFAQAAEAL HKSQSSVSYT VAKLQEQLGY PLLIIEGRKA
KLTERGEVLL RRSRHLLKEA VDLEELAHTL GQGWEPELEL VVDQAFPTPA LLRALQAFEP
QSQGTQVQLK EAVLSGGEEA LRKGSPDLVL SAIVPKGYLA DPIVEVEMIA VAATSHPLHQ
EVAPINNERL SRELQIVIRD SALETSIDSG WLGTDRRWTV SSVQSALEIV ISGIGFAWLP
KADLEYALQS GKLKKLKLIS GSERNFHMYA IFGKGERTGP ATRLLVELLQ AECNACPKRS
TIPSLP
|
|---|
| |