Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0494 |
Symbol | |
ID | 5366107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 559358 |
End bp | 560296 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640802830 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001339365 |
Protein GI | 152994530 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.574474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGCA TTGATCGCGT CTTACGCTCT AATCTGAGGC TAAGACACTT ACAATTATTA GTAGCATTAG ATGAATTTCG ACACCTAGGA AGAACCGCAG AGTTTCTATC TGTGACTCAG CCAGCCGTAT CAAAAATGCT CGCAGAAATA GAAAAAACAT TCGACTTACA GCTATTTGAA CGTTCGAGTA GAGGAACTGA ACCTACTCCA TACGGCGTAA CCGTTATTAA ATTTGCGCGT TCAGTACTAG CAGATTATGA CAGGGCCAAG ATTGAGATAG CAGCAGTTAC AGAAGGTTCA GCAGGTAGAG TACAAGTAGG TGCTATGGTT GCAGCAACAC CTACCCTACT AACGCAAGCC GTTAACAACC TTAAAAAAAA TGCGACCAAA ACAACAGTTC TAATAGAAGA AGGTGACCTA AGGCGCCTAT TACCCCGATT AAGGTCTGGG GAGCTAGATC TCATAGTAGG AAGGTTAGAG CCTGGTTATG CAGCCCCAGA TTTAGATACA GAAGCACTCT ATAACGAATC CATGTGTCTC ATTTGCTCAC CAAATCATGA AATTCTGAAA GGAAAAATTA TCGATTGGCC TCTGCTATCA CAACAAGCTT GGATTGTTCC GCCATCTTGG GCAGCATCTA GAACAAAACT GAACCAAATA TTTTACAAAC ATAACTTACA TCCACCAGAA AACATCATAG AGTCAGCATC ATTTTTAAAT ATACTGATGT CATTACAAAC AGGCTCAGCC ATAGGCTTTA TGGCTCATCA AGTTGCACAG CATTTCGAGC AACAAGGGCT AATGTCTATT ATTCCCATAG AGTTAGAAAT TGATTTGCCA CCTATAGGTA TAATCACTTT AGATGGCAGA GAAAAGACGC CGACTACACT AAAGTTAATA GAACAGCTAA GAATGGTAAA TGGATGTGAA AATACATAA
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Protein sequence | MIGIDRVLRS NLRLRHLQLL VALDEFRHLG RTAEFLSVTQ PAVSKMLAEI EKTFDLQLFE RSSRGTEPTP YGVTVIKFAR SVLADYDRAK IEIAAVTEGS AGRVQVGAMV AATPTLLTQA VNNLKKNATK TTVLIEEGDL RRLLPRLRSG ELDLIVGRLE PGYAAPDLDT EALYNESMCL ICSPNHEILK GKIIDWPLLS QQAWIVPPSW AASRTKLNQI FYKHNLHPPE NIIESASFLN ILMSLQTGSA IGFMAHQVAQ HFEQQGLMSI IPIELEIDLP PIGIITLDGR EKTPTTLKLI EQLRMVNGCE NT
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