Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0447 |
Symbol | |
ID | 5366474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 500749 |
End bp | 501399 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640802784 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001339319 |
Protein GI | 152994484 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAT TTTCTAACTA CGACATTCTG CGCAATCTGA TGTTTGCGAC ACAATGGACG ATTTTATTAT CACTCGCGGC GTTTATTGGT GGTACAACGG TTGCCTTGGC CTTAACCGCC ATGCGTTTGA CACGTAACCC TATAATGCAG CGCATCGTAA AAATTTATGT GGAACTCTTT CAAGGCACAC CACTATTGAT GCAGATGTTC TTGTGCTTCT TTGGATTGTC TATGCTGGGT TACGAAATCT CAGCGTGGAG CGCTGCCATT TTGTCACTGA CATTTTTCAC CAGTGCCTTT CTAGTAGAAA TCTGGCGTGG CTGTATCGAC ACACTACCAA AAGGCCAATG GGAAGCCAGC CGTTGTTTGG GCTTGAGCTT CTTACAAACC TTGCGTTTTA TTATCTTGCC ACAAGCGATT CGTGTCGCGA CGGCACCAAC GGTCGGTTTT TCTGTTCAGG TAATTAAAGG CACGGCCTTG GCTTCGGTGA TTGGCTTTGT GGAGCTAACG AAAGTGGGCA CCATGTTAAA CAATGCCACC TTTGAACCCT TCAAAATATT CACCCTAGTC GCTCTTATTT ATTTTGTACT TTGTTATCCA TTGTCTTTGT ACAGCAAGCA TCTGGAGAAA AAATTCAATG TCTCTCGTTA A
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Protein sequence | MIEFSNYDIL RNLMFATQWT ILLSLAAFIG GTTVALALTA MRLTRNPIMQ RIVKIYVELF QGTPLLMQMF LCFFGLSMLG YEISAWSAAI LSLTFFTSAF LVEIWRGCID TLPKGQWEAS RCLGLSFLQT LRFIILPQAI RVATAPTVGF SVQVIKGTAL ASVIGFVELT KVGTMLNNAT FEPFKIFTLV ALIYFVLCYP LSLYSKHLEK KFNVSR
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