| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0439 |
|---|
| Symbol | |
|---|
| ID | 5366733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 492497 |
|---|
| End bp | 493339 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640802776 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001339311 |
|---|
| Protein GI | 152994476 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.501254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGC TTAAGAAAAA TCACGGCAAA ACTCTTCGCT CTTTCGCCCT AGGAGCGGTC
GGTGCGCTAT TAACCGTTTC TTCGATGAAT GCCATGGCCT TTAAGGAAAG TGGCAAGATC
ATTGCGGGCT CTGATGTCAC TTTTTACCCT TATGAATATA TGAAAGATAA CAAGCCAGCG
GGATTTGATA TCGAATTCTT AGACGGCTTA GCGAAAGTAA TGGGACGAGA GTCTGTCACT
CTTGATACAC GTTGGGCGAA TTTGATCCCA GGTTTACGTG GCGGCCGTTT TGATATCACC
AACTCGGCCA TGTACATCAC GGAAGAACGT TTAAAAGTCA TTGATATGAT TCCTTACCTA
AAAAGTGGTG TATCTATCTT GTCGGTTAAA GGCAGCGACT ACCAACCTAA AACCCCTGAA
GATTTCTGCG GACACACTAT CGGCTCTATG GCAGGAACGG CATGGTTGAA ACCAGTAAGA
AAAGTCTCTG CTGAATACTG CGAAGCCAAT GGTTTAGAAC CAATAAAGAT CAATGAATAT
CCAACGGACC CACAAACCAC ACAAGCCATG TTGTCTCGTG CCATTGATGC GCAAATCACC
GATGCCGCGG TAGCAAGTGG TATTGTTGAA CGCTTAGGTA ATCGTGTGAC CTTATCGTCG
GACACCTTAC TCTACCCTGT ACTAAACGGC TTTGGCGTTA AGAAAGGCAA CGATGAAGTA
AAAGAAGCAT TAATTGCTGG TCTGGAAAAA TACAAAAAGA CACCGGAATA CGAAGCGCTA
CTTAAGAAAT ACCACTTCCA AGCGCCAACT GAAGAAGACC TCAAAACACT GATGTCTAAC
TAA
|
|---|
| Protein sequence | MTMLKKNHGK TLRSFALGAV GALLTVSSMN AMAFKESGKI IAGSDVTFYP YEYMKDNKPA
GFDIEFLDGL AKVMGRESVT LDTRWANLIP GLRGGRFDIT NSAMYITEER LKVIDMIPYL
KSGVSILSVK GSDYQPKTPE DFCGHTIGSM AGTAWLKPVR KVSAEYCEAN GLEPIKINEY
PTDPQTTQAM LSRAIDAQIT DAAVASGIVE RLGNRVTLSS DTLLYPVLNG FGVKKGNDEV
KEALIAGLEK YKKTPEYEAL LKKYHFQAPT EEDLKTLMSN
|
|---|
| |