Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0345 |
Symbol | |
ID | 5365101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 404486 |
End bp | 405403 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640802683 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001339218 |
Protein GI | 152994383 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCTATG CCGCATCTAT GGGAGAAATC ATAGTGTCAT ATCACTCCGT TGAAGATATT ACTACTTTCG AGCATTTCAA TTTAGATTTT GATGCACAAA GTTGGGTTCG ATCGGTCAAT CACCGTTTTC TTGAAGATAC TTTGGTGGAA AACGTCAGTA AACCAGGGCT TTATATTTCA ATGTTTGGTA AGTGTCAGGG CCAAACACTC AACAATGGAA TGGACCAGCA ACGAGATTAC AGCCATCAAT ACATGGTCGC TTTGGTTGAT CAGTCCTGCT CCGGCCACAT GCGCTTTCCT AACAACAGCG TTTGGCAGAC GTTATCGATT ATGCTGCCGT TAAATACACT TCATGAAAAC AGTCTTCTTC CACAACTGCA CTCAAATTTT CCTCATGCAG TACCTCAAAT ACGTCTTGCA GAGCTTGGCC CCGTCCCCAG GGATATTTTG CGATGTTGTG AAGCCATTTG GGACTGCACA TTTAAAGGCT TTGAGAGAGA GTTATTTATT AAAGCAAAGG CTCAGGAAGT ACTGGCGTTG TTTCTACATA AAAGACGCCA ACACCATCGA GCGCCAGAGA CATCCCGCAT GATCAAGTTA GGAAATGTAC TGAGTCATAT TAAAACAAAC TTAGCTCAAG ACTGGCCGCT ATCTACGGTA GCTAACTTAT CGGGTAGCAA CAGAACCTAT GTCAAACAAG ATATGAAAGA GTTAATCGGG CTGAGTTTCC GAGACTGGCT CAAACAGGTA AGACTTGAAG AAGCTTGTGA ACAATTAACT GGAAATATAT CTATCACAGA AATAGCTCAT AACGTAGGGT TCAAGAGCCA AGCTCACTTC GCAACTCTCT TCAAAAGTGA GCTTGGGGTC ACTCCAAGTG AATATCGACA ATCGCTATTC ATGAAGCGCA ACACTTAA
|
Protein sequence | MCYAASMGEI IVSYHSVEDI TTFEHFNLDF DAQSWVRSVN HRFLEDTLVE NVSKPGLYIS MFGKCQGQTL NNGMDQQRDY SHQYMVALVD QSCSGHMRFP NNSVWQTLSI MLPLNTLHEN SLLPQLHSNF PHAVPQIRLA ELGPVPRDIL RCCEAIWDCT FKGFERELFI KAKAQEVLAL FLHKRRQHHR APETSRMIKL GNVLSHIKTN LAQDWPLSTV ANLSGSNRTY VKQDMKELIG LSFRDWLKQV RLEEACEQLT GNISITEIAH NVGFKSQAHF ATLFKSELGV TPSEYRQSLF MKRNT
|
| |