| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0304 |
|---|
| Symbol | |
|---|
| ID | 5367194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 361570 |
|---|
| End bp | 362130 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640802645 |
|---|
| Product | peptidase A24A prepilin type IV |
|---|
| Protein accession | YP_001339180 |
|---|
| Protein GI | 152994345 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC TTCTTATTTC TTCTGTTTTG ATGTTTACCT CTGTTTGGGT GATTCTCACG
GACCTTTTTT ATCGTCGTAT CCATAATATT TTGATCGTTG GCTTGCTACT GGGGTGGTGT
GGGATCGCCA TATTGTCCTT TTGGTCTGTA GGTCCTTACT CGAACATACA TTCAGGAGAT
TTGCTTAGTT ATTTAGGCTA TTCCATTGCT GGAGCTGCTG GGGTTCTGAT TGTTGGCTTT
GGGCTTTTCT TGATTGGGCA AATGGGAGCA GGGGATGTCA AGTTGATGTC TGTTTTATGC
CTATGGGTCG GTTATGACAA CCAGTTGGTC TTTCTTGTTG TTACCGCTTT AGTGGGAGGA
ATGCTTGCGC TGCTTATGCC CGTTTTGTCT CTATTGGAAA TTGCTGGAGC CAAAGTGATT
GTGCAAATTT CGAGCCGATT TCCTCGGTTG AAAATTCCAG CGCCTTTGGT GTTTTCTCGC
GAAGGTGTTA AAGGGCTGCC TTACGGGTTG GCTATTTCTG GTGGGGCATT TTATTTATTA
ATAAGCCCAT TTTCTCACTA A
|
|---|
| Protein sequence | MTDLLISSVL MFTSVWVILT DLFYRRIHNI LIVGLLLGWC GIAILSFWSV GPYSNIHSGD
LLSYLGYSIA GAAGVLIVGF GLFLIGQMGA GDVKLMSVLC LWVGYDNQLV FLVVTALVGG
MLALLMPVLS LLEIAGAKVI VQISSRFPRL KIPAPLVFSR EGVKGLPYGL AISGGAFYLL
ISPFSH
|
|---|
| |