Gene Mmwyl1_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0025 
Symbol 
ID5368229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp28499 
End bp29767 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content42% 
IMG OID640802368 
Productextracellular solute-binding protein 
Protein accessionYP_001338903 
Protein GI152994068 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.669897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.473652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATC CGTGGGAATT TATAAAACCT TCCTTGCTAT CCATATCAAT CGTGGCATCA 
GCCGCACAAG CTACTGAAGT AGTGCTGGTG TCTGGAGCCG TTGGTAAAGA TATTGAAGTA
TTGAAGGAAG TGGTAAAACC TTGGGAAAAA AGCACTGGAA ATAAACTAAC CGTCTTTCCT
ATGCCAGCTT CTACCACAGA CCAATTTGGC CAATATCGTC TATGGTTAGC AGCAGGGAAC
GCTGATATCG ATGTGTATCA AACAGATGTT ATTTGGGCCC CTCAACTTGC TAATAATTTT
GTCGATCTAA CTCCTTATAC TAGAGATATC GTCGACCAAC ATTTCCCTTC CATCATTGAA
TCGCAAACAA CCAACGGAAA ACTAGTTGCT CTACCTATCT TCACCGACGC TCCGGCCCTT
TATTACCGTA AAGACTTACT CAAAAAATAT AATAAACCGG TGCCAAATAC TTGGGGAGAA
TTAACTGAGA CAGCCAAATA CATTCAAACA AAAGAACGAG AAGCGGGTAA CTCGGATATG
TGGGGATTCG TTTGGCAAGG TAACGCTTAT GAAGGCTTAA CTTGTGATGC TTTAGAATGG
GTGAAATCTT TTGGTGGAGG TCAAATAGTT GAAGCTGATG GTACGATTTC AATTAATAAC
CCAAACGCTG TTGCAGCGCT TAAAATGGCA AAATCTTGGG TAGGTGATAT TTCTCCGGCA
GGCATTCTAG CTTATCAGGA AGAGGATGCC CGAGGCGTTT GGCAGACAGG TAATGCCGTT
TTTATGCGTA ACTGGCCTTA TGCCTATTCT CTGGGCAACA CCGAAGAAAG TGCGATAAAA
GGTAAATTTG GCGCAGCACC TTTGCCAAGT GGCACAAGTC AAAATAAATC AGCGGCAACA
CTGGGCGGAT GGAATGTAGC AGTTTCTAAA TACTCTAAGC ATAAAGAAGC GTCTATTTCA
TTGGCTAAAT ACCTTGCATC TGAAGAAGTA CAAAAGTATC GGGCGCTCCA TTCATCGAAT
TTACCAACCA TTATTTCCCT CTATGACGAT AAAGATATAA AGGAACAACA GCCAATAATT
GCGCAATGGA AAGATGTGTT TTTACATGCT GTTCCTCGTC CTTCCGCACC CACAAAAATC
AAATACAACG AAGTGTCTTC TAAATTTTTC TCCGCAGTTC ATAGCACGCT TGCAGGAAGT
GGCTCAGCGG AAGAAAACCT TGAAGTACTT GAATACGAAC TCGAGACGTT AAAAGGAAAT
ACCTGGTAA
 
Protein sequence
MRNPWEFIKP SLLSISIVAS AAQATEVVLV SGAVGKDIEV LKEVVKPWEK STGNKLTVFP 
MPASTTDQFG QYRLWLAAGN ADIDVYQTDV IWAPQLANNF VDLTPYTRDI VDQHFPSIIE
SQTTNGKLVA LPIFTDAPAL YYRKDLLKKY NKPVPNTWGE LTETAKYIQT KEREAGNSDM
WGFVWQGNAY EGLTCDALEW VKSFGGGQIV EADGTISINN PNAVAALKMA KSWVGDISPA
GILAYQEEDA RGVWQTGNAV FMRNWPYAYS LGNTEESAIK GKFGAAPLPS GTSQNKSAAT
LGGWNVAVSK YSKHKEASIS LAKYLASEEV QKYRALHSSN LPTIISLYDD KDIKEQQPII
AQWKDVFLHA VPRPSAPTKI KYNEVSSKFF SAVHSTLAGS GSAEENLEVL EYELETLKGN
TW