| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1706 |
|---|
| Symbol | |
|---|
| ID | 5328960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1651251 |
|---|
| End bp | 1651817 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640794258 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330913 |
|---|
| Protein GI | 150403619 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.10125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACTA AATTACCTTA TTTGATAACT GCCTTTGGGA TATCAGTTAA TGTTTTAGGC
GGATTTATTG CTACATTTTA TGAATTACCC ATATTTTTAA ATAATCTTGG GACCATACTA
TGTGGATTGT TGCTGGGGCC TGCAGGTGGT GCAATAACCG GCCTTTTTTC AAATCTGATA
ATTGGTTCTA CCGTTAATTC TATTTATATT CCATTTACAA TCGTAAATGT TGTTGTGGGT
TTTGTTGCAG GTTATGCCGC AATTAAACAT AATCGTGAGT TTACTTCAAT GATAGTGCAT
GCTTTTTTAA TATCAATCAT AGCATTATGT CTTGCAATGC CAATAGAGAT ATTCATCTTT
GGAGGGCCAC TTGACCAGAC CCTTATTTCA TACGCCTCAA CAATAACTGC AAATACGGGA
TTAAACATGT TTACTGCAAC ATATTTTGCA GAATTTCCAC TAATGGTTGC AGATATTGTT
TTGTCTGCGA TTTGGGCTTA TGCAATATTA ATGTTACTCC CCACAAAAGT ACTGACTATG
TTAAAAATCA ATAATGAAAA TATTTAA
|
|---|
| Protein sequence | MSTKLPYLIT AFGISVNVLG GFIATFYELP IFLNNLGTIL CGLLLGPAGG AITGLFSNLI
IGSTVNSIYI PFTIVNVVVG FVAGYAAIKH NREFTSMIVH AFLISIIALC LAMPIEIFIF
GGPLDQTLIS YASTITANTG LNMFTATYFA EFPLMVADIV LSAIWAYAIL MLLPTKVLTM
LKINNENI
|
|---|
| |