Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1262 |
Symbol | rplP0 |
ID | 5328224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1228565 |
End bp | 1229572 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640793815 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001330476 |
Protein GI | 150403182 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.576197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGACG CTAAATCAGA ACATAAGATT GCCCCTTGGA AAATTGAAGA AGTTAATGCA TTAAAAGAAT TACTTAAAAG TACAAGCATT ATTGCATTAA TTGACATGAT GGAAGTTCCT GCGGTACAAC TCCAAGAAAT CAGGGACAAA ATCAGAGACC AAATGACATT AAAAATGTCA AGAAACACAC TCATGAAAAG GGCAATTGAG GAAGTTGCTG AAGAAACCGG AAATCCTGAA TTTGCTAAAT TAGCAGATTA CTTGGACAAA GGTGCTGCAA TCATTGCTAC CGAAATGAAC CCATTCAAAT TATTCAAAAC ACTTGACGAA AGCAAAAGCC CTGCACCTGT TAAAGGAGGC GCTACTGCAC CATGCGATAT TGAAGTTAAA GCTGGTTCAA CAGGAATGCC ACCAGGACCA TTCTTAAGTG AATTGAAAGC AGTTGGAATC CCTGCTGCTA TTGATAAGGG TAAAATCGGA ATCAAAGAAG ACAAAGTCGT CGTTAAAGAA GGCGAAGTTG TCTCACAAAA GCTTGCTGTT GTACTCTCTG CATTAGGTAT TAAACCAGTT ACAGTTGGTT TAAACGTACT CGGAGTTTAC GAAGATGGTG TTATATACAC TGAAAGCGAT TTAAAAATCG ATGAAGAAGA ATTCATCGGA AAAATTCAAA AAGCTTACAC AAGCGCATTC AACTTGTCAG TTAACGCTGT TATCCCAACA AGCGCGACAA TTGAAACAAT CGTTCAAAAA GCATTCAATG ATGCAAAAGC TGTATCAGTT GAAAGTGCAT TCGTAACAGA TAAAACCGCT GATGCAATCC TTGGAAAAGC TTACGCTCAA ATGATTGCTG TTGCAGGTCT TGCTGGCGAT GACGCTTTAG ACGAAGAATT AATAGAAAAA ATGTCATCAG GCGCAGCTGC ACCAGTTGAA GAAGCTCCTG TTGAGGAAAA GAAAGAAGAG AAAAAAGAAG AAGCTGCACC AGCTGCAGGT CTTGGAATGC TCTTCTAA
|
Protein sequence | MIDAKSEHKI APWKIEEVNA LKELLKSTSI IALIDMMEVP AVQLQEIRDK IRDQMTLKMS RNTLMKRAIE EVAEETGNPE FAKLADYLDK GAAIIATEMN PFKLFKTLDE SKSPAPVKGG ATAPCDIEVK AGSTGMPPGP FLSELKAVGI PAAIDKGKIG IKEDKVVVKE GEVVSQKLAV VLSALGIKPV TVGLNVLGVY EDGVIYTESD LKIDEEEFIG KIQKAYTSAF NLSVNAVIPT SATIETIVQK AFNDAKAVSV ESAFVTDKTA DAILGKAYAQ MIAVAGLAGD DALDEELIEK MSSGAAAPVE EAPVEEKKEE KKEEAAPAAG LGMLF
|
| |