| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1153 |
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| Symbol | aksA |
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| ID | 5327844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1123308 |
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| End bp | 1124468 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640793708 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_001330370 |
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| Protein GI | 150403076 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTGGA AAGCGGTATC CCCATACAAC CCAAAATTAG ATTTAAAAGA CTGTTACTTG
TATGATACAA CATTGCGAGA TGGTGAACAA ACCCCCGGGG TCTGTTTTAC ACATGATCAA
AAACTTGAAA TTGCTAAAAA ATTGGATGAA CTTAAAATTA AGCAGATTGA AGCAGGTTTT
CCAATTGTTT CTGAAAACGA GAGAAAATGT ATTAAATCCA TTACTGGCGA AGGACTGAAC
GCACAAATTT TGGCATTATC AAGAGTTTTG AAGGAAGATA TTGATAAAGC AATAGAATGT
GACGTTGATG GGATAATCAC ATTTATTGCA GCTTCTCCGA TGCATTTGAA GTATAAATTA
CATAAAAGCC TCGATGAAGT CGAAGAAATG GGTATGAAAG CCGTTGAATA CGCAAAAGAC
CACGGACTTT TCGTAGCGTT CTCTGCAGAA GATGCAACAA GAACTCCGAT TGAAGATATC
ATCAGAATTC ACAAAAATGC AGAAGAACAC GGTGCTGATA GGGTTCATAT TGCAGATACC
CTCGGATGTG CTACACCCCA ATCAATGTAC TACATCTGTT CTGAATTAAG CAAACATTTG
AAAAAAGCAC ATATTGGAGT ACACTGCCAC AATGACTTTG GATTTGCAGT TATAAACTCG
ATATATGGGT TATTAGGTGG GGCAAAAGCA GTATCTACCA CAGTCAATGG AATAGGCGAA
CGAGCAGGAA ATGCTGCAAT TGAAGAAATT GTAATGGCTT TAAAAGTACT TTACGACTAC
GACATGGGCT TAAACACTGA AATCTTAACC GAAATGTCAA AACTTGTTGA AAAATATTCA
AAAATCAGGA TTCCTGAAAA TAAACCTCTT GTTGGGGAAA TGGCATTTTA CCATGAAAGT
GGAATACACG TTGATGCGGT TTTAGAAAAT CCTTTAACAT ATGAACCATT TTTACCTGAA
AAAATCGGTC AGAAAAGAAA AATCATACTT GGAAAACATT CAGGTTGCAG GGCAGTTGCT
CACAGGTTGC AAGAACTTGG TCTTGAAACA TCCAGAAATG AACTCTGGGA AATTGTAAAG
AAAACAAAAG AAACTAGGGA AGAAGGTACC GAAATAAGCG ACGAAGTGTT TAAAAACATT
GTCGATAAGA TTATTAAATA A
|
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| Protein sequence | MDWKAVSPYN PKLDLKDCYL YDTTLRDGEQ TPGVCFTHDQ KLEIAKKLDE LKIKQIEAGF
PIVSENERKC IKSITGEGLN AQILALSRVL KEDIDKAIEC DVDGIITFIA ASPMHLKYKL
HKSLDEVEEM GMKAVEYAKD HGLFVAFSAE DATRTPIEDI IRIHKNAEEH GADRVHIADT
LGCATPQSMY YICSELSKHL KKAHIGVHCH NDFGFAVINS IYGLLGGAKA VSTTVNGIGE
RAGNAAIEEI VMALKVLYDY DMGLNTEILT EMSKLVEKYS KIRIPENKPL VGEMAFYHES
GIHVDAVLEN PLTYEPFLPE KIGQKRKIIL GKHSGCRAVA HRLQELGLET SRNELWEIVK
KTKETREEGT EISDEVFKNI VDKIIK
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