Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0936 |
Symbol | |
ID | 5327810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 899730 |
End bp | 900650 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640793472 |
Product | hypothetical protein |
Protein accession | YP_001330154 |
Protein GI | 150402860 |
COG category | [S] Function unknown |
COG ID | [COG4071] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.112147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGTCCC AAAATATAAA AATAATGGAG ATAGTTTTAA CTCGTGAAAA AATGGAAATA ACTGCAACAC CGATAAGAAC AAGATATATC GATAGAAACG AAGACTTTGT ATCAGAATCC ATCAATTCTT TAAAAAATGA AATTGAAAAC GGATTTGAAA TAAAAAACGG GGATTTTTTA GTAGTCAGTG AAAAATTTAT CGCTACAAGT GAGGATAATT TTGTTGATGA AAGTTTGGCA GACCCGAAAT TCTGGGCATA TTTTACATAC TACCTATCAA AATACGGCTG GGGATATGTT TTAGGCCCGC TTTTAGGTAC CAGAGGAGAT AGGGTTAAAA ATTTAAGAAA AATGCCAAAA AAGGAAACAT TGAAACACAA ACAGGTTGTA ATCGAAAATG TAGGATTAAT ATACGCACTA AAACCTGCGT CAGAAGGCGG AATTGATTTA ACAAACGTTC CTGGAACTTA TGCATCCCTC CTTCCAGAAA ACCCTGAAAA TTCTGCAAAA AAACTCCATA AACAAATAAA AGAAGACTTA AATCTGGATT TAACTGTCAT GGTAATTGAC ACAGATGCAA CGTACAGATT TTTTAATTGC TATGTAACTG CACTTCCAAT TGCAATTGAT GGAATAATTT CAAAAATAGG TGTTTTTGGA TATATTTTGG GGAAATTTGG AAAAATACTA AATCAGGGAG GACTATGTGG CGCAACCCCG CTTGCAATTT CAGGAAACGA AAATTACAAA AAATACCCCT TAAAAACGAT TCTATATATT GCAAACCTTT CGGATACTTC TCAGGTCCCA TATACTAAAT CAATACACGA TTTGATGAAA AAATACAATA CCTTTGAAAT AACCGTTGAT GTTTTAAAAG AGATGGAACA CAGCCCGTTA GTTATTGTAA AATGCGAATA A
|
Protein sequence | MESQNIKIME IVLTREKMEI TATPIRTRYI DRNEDFVSES INSLKNEIEN GFEIKNGDFL VVSEKFIATS EDNFVDESLA DPKFWAYFTY YLSKYGWGYV LGPLLGTRGD RVKNLRKMPK KETLKHKQVV IENVGLIYAL KPASEGGIDL TNVPGTYASL LPENPENSAK KLHKQIKEDL NLDLTVMVID TDATYRFFNC YVTALPIAID GIISKIGVFG YILGKFGKIL NQGGLCGATP LAISGNENYK KYPLKTILYI ANLSDTSQVP YTKSIHDLMK KYNTFEITVD VLKEMEHSPL VIVKCE
|
| |