| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0384 |
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| Symbol | |
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| ID | 5327984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 395329 |
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| End bp | 395859 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640792905 |
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| Product | tRNA-splicing endonuclease subunit alpha |
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| Protein accession | YP_001329604 |
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| Protein GI | 150402310 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.295816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC CTAAGAAAAC AATACCTGCA AAACTTTCAG ACGAAAGGAT TGTAATTTAC
GATAAAGACG GGATATCCCG GTTAAACGAA AAAAGATACG GTGAACTTCA CGAAAATTTT
TTGTCGCTTT CTTTTGTTGA AGGACTCTAC CTTGTATCAA AAAACTGGAT ATCATTGCGA
GATAAAACTA ATAAACTTCT TTCATTTGAA GAATTGTTCG ATGTTGCACA GAATATTGAT
AGAAAATTGT GTATCCGATA TTTGGCATAT AAAGACCTCA GAAATAGGGG TTATACTGTA
AGAACTGGTT TAAAATATGG TTCTGATTTT AGGCTTTACG AAAGAAGCAA TATTGACGAA
ATTCACTCTA GATACCTTGT AAAAGTTTTT TCAGAAGAAA TACCTTGCGA AATTTCAGAA
ATTACGGGAT TTGTTAGAGT TGCACATTCG GTTAGAAAAG AATTGATTAT TGCAATAGTT
GATGCTGATG GGAGCGTCGT ATACTACAAC ATGGGATATT TAAAGCTTTA A
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| Protein sequence | MAKPKKTIPA KLSDERIVIY DKDGISRLNE KRYGELHENF LSLSFVEGLY LVSKNWISLR
DKTNKLLSFE ELFDVAQNID RKLCIRYLAY KDLRNRGYTV RTGLKYGSDF RLYERSNIDE
IHSRYLVKVF SEEIPCEISE ITGFVRVAHS VRKELIIAIV DADGSVVYYN MGYLKL
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