Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0139 |
Symbol | |
ID | 5328051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 158132 |
End bp | 158704 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640792660 |
Product | exonuclease RNase T and DNA polymerase III |
Protein accession | YP_001329360 |
Protein GI | 150402066 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0192788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTTT TTTTAGATAC TGAAACAACA GGGCTTCACC CGGGTCAGAT TGCACAGCTT TCATATCTTG TAACTGACGA AGATTTGAAC CTAAAAAAAG TTTTCAATCA ATACTACTCA GTAGACCGCA TGTCAAGAAG TGCTGCAAAA ATTCACGGCT TAACTATGGA AATACTTGAC GAATTATCAA ATGGAATGAC TTTCGAAGAC ACCGTTGACG AAGTTAGGGA TGATCTTGAA GATTCCATAA TAATCGGACA CAATATCTCT TTTGATATTC GATTTTTAAA GACAGAATTT GAAAGGCTAG GTCCGGAATA TGTTCCAAAA GATAAATTCT GTACAATGTT TCATTTTACT CCAATATGTA AACTTCCAGG TCAAAAAAGA TATAAAAGAC CAAAATTGGT TGAATTAATG GAATTTTTAG AACAATGCCC TCACGAAGGA CTTGAGTTTA CAAAAGAAGC GTATGGTTGT AGTGACGTTG GATTTCACGA TGCAAGGTAC GATACCGGGA TTTTATATCT TTGCTACAAA AAAGGAGTTT TACTCGACCA TATAAAAAAA TAA
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Protein sequence | MYVFLDTETT GLHPGQIAQL SYLVTDEDLN LKKVFNQYYS VDRMSRSAAK IHGLTMEILD ELSNGMTFED TVDEVRDDLE DSIIIGHNIS FDIRFLKTEF ERLGPEYVPK DKFCTMFHFT PICKLPGQKR YKRPKLVELM EFLEQCPHEG LEFTKEAYGC SDVGFHDARY DTGILYLCYK KGVLLDHIKK
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