Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0002 |
Symbol | |
ID | 5327901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 2225 |
End bp | 4108 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640792525 |
Product | UvrD/REP helicase |
Protein accession | YP_001329226 |
Protein GI | 150401932 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00501949 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000152261 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGTTGAAA AATTGCTAGA ACCTGAAATA GTTGAGATAT TTGGCCATGT GCTACGGGGG AATAATTTTC TTCTGAGTGG TGGGGCAGGT AGTGGAAAAA CATATTCGTT AATCCAAGTA ATAAGAAAGG CATTAAACGA TAACCCTAAT GCTAGTATCG CATGTATTAC ATATACAAAT TCAGCAGTAA ATGAAATTAA ATTAAAGATT AATCATGATA ACTTAATGGT TTCAACGATC CACGATTTTT TATGGAATAA TATCAAACAA TTCCAAAAAG AATTAAAAAA TGGAATAATT GAACTTTCAG AACTAGAAAC TTCAAAAATT AAGTTTAAAA ATGAAAATGA TAAAAGTCAT TTTGTAGAAA ATGTGTCAAA TATTCAGTAT AAAGAATATA TTCAAATGAA AAATGGAATA ATTTCGCATG ACGAAGTACT CGTTTTAGCC CACCATCTGT TCGAAAAACA TGATTTACTT TGTAATATTC TAAAAGATAA ATTTAAATTT ATATTTCTTG ATGAATATCA GGATACCAAT AAATTGGTAA TTGAAATACT ATTAAAGCAC TTGAAAAAAT GTAACAAGGA ACAGATTATT GGATTTTTTG GAGACTCAAT GCAGTCGATT TATGATGATG GAATAGGGGA TTTAAAAGAT TATGTAAACT CTGGAGAAGT TAAAGAAGTA GTGTTGAATC AGAATCGAAG AAATCCAAAA TTAGTAATTG ATTTGGCAAA TAAGTTAAGA ACCGACAATG TGATACAAGA ACCTTCTAAT GATATAAATG CACCAAATAT GAAGGATGGG TCAGTAATTA TTGGAAAAAT AAACTTTTTG TATTCTACAA CTAACGATGT AGAAAATATT AAATCTACAC AGTATTTTTC AAATTGGAAT TTTAATGATA CTATTAAAAC AAAAGAATTA AGTTTAACTC ATAATCTAAT CGCTCCAAAA GCAGGATTTT CAAATTTAAT GGCAATATAT GATAAAGATC CAATGTTTAG ACTAAAAAAT GATATATTAT CTAAATCTAA TGAAAAATGC ATTGAATTGG ATGATTCTAA GTCATTCGAA AAAATTATTG AAGAAGTTGA TTCTTTATTT AGAAATTCTA AAAAACAGAT GATAAACTCG TCAAACGAAG TAAAAGAACT ATATGATCAC CTGAAGAACT TACCATTTTC TGAGATTAAG AAAATTTATT TTGACAAAGA TTCATTAATA GATAATAAAA AAGAAACAGA TGATGAGGGT TCTAACGACT CAAAAAGGGA TAATTTAATA AAACATTTGT TTAAAATAGA AAAAATTATT CAAAATTATA AAAATAAGGA TTATAACGAG TTTATACGAA AAACAAATTT TAAAATAGAT TCAATTGCAA AAAAAAGAGA ACTAAAAAAT ATCATTGACA AAATAGGAAA TTTTTCTGAA CTTAAAATCG AAGAAGTAAT TAATTTATGT GATGAAAAGG AGCTATGTAA AAAAGATGAC AGTTTCAATA CATTCATTGA AAAAAATCAA TATTTGTATA ATCGGGTTAA GGCCCTACAA TATTTAGAAT TTCAAAATTT ATTTAATTAT TTGGAGGGAT TTACCCCATT TTCGACACAA CATAAGGTTA AAGGGTCAGA ATTTGAAAAT GTACTTGTTA TACTAGACAA TGGGGGTTGG AATAATTATA ATTTTGAATA TCTATTTTGT AATAGGATAG ATAAACAAAG TGTGTTATTA AGGACTCAAA AGATATTTTA TGTATGTTGT ACTCGTGCAA AAGAGAATCT AAATATTTAT TACCATAACC CCAACTCTCA GACCATCAGC AAAGCAATTG AATGGTTTGG GGAAGAAAAT GTCCATAATT TGGACGATAA TTAA
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Protein sequence | MVEKLLEPEI VEIFGHVLRG NNFLLSGGAG SGKTYSLIQV IRKALNDNPN ASIACITYTN SAVNEIKLKI NHDNLMVSTI HDFLWNNIKQ FQKELKNGII ELSELETSKI KFKNENDKSH FVENVSNIQY KEYIQMKNGI ISHDEVLVLA HHLFEKHDLL CNILKDKFKF IFLDEYQDTN KLVIEILLKH LKKCNKEQII GFFGDSMQSI YDDGIGDLKD YVNSGEVKEV VLNQNRRNPK LVIDLANKLR TDNVIQEPSN DINAPNMKDG SVIIGKINFL YSTTNDVENI KSTQYFSNWN FNDTIKTKEL SLTHNLIAPK AGFSNLMAIY DKDPMFRLKN DILSKSNEKC IELDDSKSFE KIIEEVDSLF RNSKKQMINS SNEVKELYDH LKNLPFSEIK KIYFDKDSLI DNKKETDDEG SNDSKRDNLI KHLFKIEKII QNYKNKDYNE FIRKTNFKID SIAKKRELKN IIDKIGNFSE LKIEEVINLC DEKELCKKDD SFNTFIEKNQ YLYNRVKALQ YLEFQNLFNY LEGFTPFSTQ HKVKGSEFEN VLVILDNGGW NNYNFEYLFC NRIDKQSVLL RTQKIFYVCC TRAKENLNIY YHNPNSQTIS KAIEWFGEEN VHNLDDN
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