| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3570 |
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| Symbol | |
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| ID | 5324458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3776678 |
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| End bp | 3777457 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640792519 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001329220 |
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| Protein GI | 150398753 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00199675 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTCG GCATCGAAGG CAAAAAAGCG CTTGTTCTGG GCGGCAGCAA GGGGCTTGGG
CGCGGTATCG CCGAAGCGCT TGCGGCCGAA GGCGTTGCGG TCGCCTTGAC CGGCCGGAAC
GAAGAGACCG CAGGCAGGGC CGCGGCGGAA ATCAGTCCGG ATGCCCTCGG CTTTGCGCTC
GATCTGGCCG GGTCCGAGGC CATCGATCCG TTCCTTGACC GGCTCGCCTC CGCCTTCGGT
CCGATCGACA TTCTGGTGCT GAACGGAGGC GGTCCCCCGC CCACCCATGC CAGCGACATT
GATCCGGATT TCTGGCGGGC TCAATTCGAG GCGATGGTGC TTTCCGCGAT GCGTATCGCC
CACCGGCTGC TTCCGCCGAT GCGGGCGCGC GGCTTCGGCC GCATCATCGC CGTCGCCTCC
ACCAGCATTC GCGAGCCGAT CCCCGGACTG ACGGCCTCCA ACGCGCTGCG CAGCGCACTT
GCCGGCTGGA TGAAGACGCT CGCCGGTGAG GTCGCAGCCG AAGGCGTGAC CGTCAACATG
CTGTTGCCGG GCCGGCTTGC GACGGACCGG ACGCTGAGTT TCGACCGAAT GGATGCAGAG
GCCGAGGGCG TCAGCGTCGA AACCATCGCC GCGCGCAGCC AGGTGGAAAT TCCGGTCGGG
CGTTATGGGA CGCCTGTCGA GTTCGGTGCT GCCGCCGCCT TTCTCGCAAG CCGCCAAGCC
GCCTATATCA CCGGAATTGC GCTTCCCGTC GATGGCGGCC TCAGCCGGTC GATGCTGTGA
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| Protein sequence | MDLGIEGKKA LVLGGSKGLG RGIAEALAAE GVAVALTGRN EETAGRAAAE ISPDALGFAL
DLAGSEAIDP FLDRLASAFG PIDILVLNGG GPPPTHASDI DPDFWRAQFE AMVLSAMRIA
HRLLPPMRAR GFGRIIAVAS TSIREPIPGL TASNALRSAL AGWMKTLAGE VAAEGVTVNM
LLPGRLATDR TLSFDRMDAE AEGVSVETIA ARSQVEIPVG RYGTPVEFGA AAAFLASRQA
AYITGIALPV DGGLSRSML
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