Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3567 |
Symbol | |
ID | 5324455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3774565 |
End bp | 3775023 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792516 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_001329217 |
Protein GI | 150398750 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00720162 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGCG ATAGTAGACT TTCCATCACC CTGCATGCGC TGCTTCATAT GGCGGAGCGT AAAACCATCA CCTCGGAAGA GCTGGCGGCC TGCCTGTCCA CCAACCCCGT CGTGGTCCGG CGCACGATGG CCGGTCTGCG GGAAGCGGGG CTGGTGCGCT CTGAAAAGGG GCATGGCGGT GGCTGGTCGC TCGCCTGCGA CCTCGCAACG GTCAGCCTCG CAGACGTGCA TGCCGCTCTC GGGGAGCCTG CCTTTTTTGC GATCGGCAAT CGCACCGAGT CCCCCGGCTG CCTGGTGGAA CAGGCCGTCA ATGCCGCAAT GGACGGGGCG CTCCGGGAAG CCGAGCTTCT CCTCCTCCAG CGACTGGGAA CGATAAGTCT GGCAGATCTT TCGCGTGATT TTCAGCAACG GATGGCGCTC GGTCGCCAGA AAACGAAGGA GCAAAATCAT GTCGGTTGA
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Protein sequence | MKRDSRLSIT LHALLHMAER KTITSEELAA CLSTNPVVVR RTMAGLREAG LVRSEKGHGG GWSLACDLAT VSLADVHAAL GEPAFFAIGN RTESPGCLVE QAVNAAMDGA LREAELLLLQ RLGTISLADL SRDFQQRMAL GRQKTKEQNH VG
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