Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3552 |
Symbol | |
ID | 5324440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3757797 |
End bp | 3758705 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792501 |
Product | hypothetical protein |
Protein accession | YP_001329202 |
Protein GI | 150398735 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.963369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGGG ATTTGCGACG CGGAAGCGTG GAAATGACGG CTGCCATGCT GATTTCGGGA ACGATCGGCT GGTTTGTGCT GATGTCGGGG CAGCCTGTGG CGGGTGTCGT CTTCTGGCGT TGCGTGTTCG GCGCCGCGAC GCTTGCCGTG CTTGCGGCAT TTTTCGGCCT CATCGACCTC AAGCACCTGC GGATGAAGGT CATCTTGCTT TCGGCGTTGG GCGGCGTCGC GATCGTCCTG AACTGGCTAC TGCTCTTCGC CGCCTATCCC CGCGCTTCTA TCTCCATTGC CACGATGGTC TACAACACGC AGCCCTTCAT GCTGCTCGGG CTTGGTGCGA TCTTTCTCGG AGAGAAGATC ACCGCCAGCA AGCTTCTATG GCTCTCGCTC TCCTTCGCAG GCATGGTCGC GATTGTCTCC GCCGAGCCCG CGGGTGGCTA CGAGCCAGTC GATTATCTCA CCGGAATAGC ACTGTCGCTC GGTGCCGCAT TCTTCTATGC CATCGCTGCG CTCGTCACCA AGCTCCTCAA GGGCACGCCG CCGCATCTGA TCGCGCTGGT ACAGGTCATA ACCGGAGCGG CCATGCTCGC TCCCTTCGCC CTTGCCGCGC CGCTGCCGCA GGGAACGCTC CAGTGGACGC TCCTCTTGAC CGTGGGGGTG GTCCACACGG GCATCATGTA TATCCTGCTT TACGGCGCCA TTCAGAAGCT GCCGACCCAC ATGACGGGCG CCCTTTCCTT CATCTATCCG ATCGCTGCGA TCCTGGTCGA CCGCATCGCA TTCGGCCACG CCTTACAGCC GGCGCAGATC GCAGGCTCGA TCGCGATCCT CATTGCAGCC GCGGGCACAA ATCTCGGCTG GACCCTCCGG CCACCGTCGG CCAAGCGTGG ATTGAAACGG CAAGCCTAA
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Protein sequence | MDRDLRRGSV EMTAAMLISG TIGWFVLMSG QPVAGVVFWR CVFGAATLAV LAAFFGLIDL KHLRMKVILL SALGGVAIVL NWLLLFAAYP RASISIATMV YNTQPFMLLG LGAIFLGEKI TASKLLWLSL SFAGMVAIVS AEPAGGYEPV DYLTGIALSL GAAFFYAIAA LVTKLLKGTP PHLIALVQVI TGAAMLAPFA LAAPLPQGTL QWTLLLTVGV VHTGIMYILL YGAIQKLPTH MTGALSFIYP IAAILVDRIA FGHALQPAQI AGSIAILIAA AGTNLGWTLR PPSAKRGLKR QA
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