Gene Smed_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3545 
Symbol 
ID5324433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3751192 
End bp3751560 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID640792495 
Producthypothetical protein 
Protein accessionYP_001329196 
Protein GI150398729 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTG AGCGATCGGA CGACCTCAAG CTGAAGGCTC TGAAGCGGGG CCATCTGGCC 
GAATACCGCG CGGCGCTCTG CCTGATCCTG AAAGGTTACC GCATCGTTGC GATGCGCTAT
CGCACCAGGC TGGGTGAAAT CGACATCATC GCCCGGCGCG GGGATCTCAT CGCCTGCGTC
GAGGTGAAGG CCCGGCGGAG TTTTGACGAT GCGATCTTCG CCGTTTCCAG CACTGCGCAA
CGACGCATCC GTGCCGCAAG CGAGGTTTGG CTGTCGCGTC AGGGCGACTT CCATCGCCTG
TCGCTGCGCT ACGATATCGT CGCCGTCATG CCCTGGCGAT GGCCGCGGCA TCTGACGGAC
GCTTTTTGA
 
Protein sequence
MKAERSDDLK LKALKRGHLA EYRAALCLIL KGYRIVAMRY RTRLGEIDII ARRGDLIACV 
EVKARRSFDD AIFAVSSTAQ RRIRAASEVW LSRQGDFHRL SLRYDIVAVM PWRWPRHLTD
AF