Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3521 |
Symbol | |
ID | 5324409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3722866 |
End bp | 3723414 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792471 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001329172 |
Protein GI | 150398705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGCT CCCGGCGTTT TGAGATCCGT CCGGCTGAAC CCGACGATCT GATGATGATC GCGTCGGTGC TGGTCCGTAC GTGGCGCGCA ACGTTTCGCG GCATTATCGC CGATGATTAC CTCGATGCCA TGACCGTCGA AGAACAGGCC ATTCGGCACG CCCGGCGCAT GCGTTTCCCG GGCACCTTGA TGATGGCCGC AGCCGACATG GACGAGGATC GGGTGGTCGG CTTTGCAAAC TATGGCAAGG CCAGGGGCAT GCCGCCCGCC TTCGATCGAG AATTGTACGA GCTCTATCTC CTGCCGGAGT TCCACCGCGC GGGCCTTGGT TCTGCGTTGG TGCGGGCTGT CGCCGCGCAT TGCCAGGAGA CAGGGGGAAA CTCGCTTTTT GCCTGGGTGT TGAAGGACAA TCCCAACAGG GCCTTTTATG AGCGGCTCGG CGCGCGCGCC GTGGCTCAGG GCAGGGTCAG CGTCGGCAGA GCGAGTCTTG ACCAGCTTGC TTACCGCTGG GACGATCTGA GGGCTCTCTC CGGAGATGCA TCGGCCTGA
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Protein sequence | MQSSRRFEIR PAEPDDLMMI ASVLVRTWRA TFRGIIADDY LDAMTVEEQA IRHARRMRFP GTLMMAAADM DEDRVVGFAN YGKARGMPPA FDRELYELYL LPEFHRAGLG SALVRAVAAH CQETGGNSLF AWVLKDNPNR AFYERLGARA VAQGRVSVGR ASLDQLAYRW DDLRALSGDA SA
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