Gene Smed_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3521 
Symbol 
ID5324409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3722866 
End bp3723414 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID640792471 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001329172 
Protein GI150398705 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCT CCCGGCGTTT TGAGATCCGT CCGGCTGAAC CCGACGATCT GATGATGATC 
GCGTCGGTGC TGGTCCGTAC GTGGCGCGCA ACGTTTCGCG GCATTATCGC CGATGATTAC
CTCGATGCCA TGACCGTCGA AGAACAGGCC ATTCGGCACG CCCGGCGCAT GCGTTTCCCG
GGCACCTTGA TGATGGCCGC AGCCGACATG GACGAGGATC GGGTGGTCGG CTTTGCAAAC
TATGGCAAGG CCAGGGGCAT GCCGCCCGCC TTCGATCGAG AATTGTACGA GCTCTATCTC
CTGCCGGAGT TCCACCGCGC GGGCCTTGGT TCTGCGTTGG TGCGGGCTGT CGCCGCGCAT
TGCCAGGAGA CAGGGGGAAA CTCGCTTTTT GCCTGGGTGT TGAAGGACAA TCCCAACAGG
GCCTTTTATG AGCGGCTCGG CGCGCGCGCC GTGGCTCAGG GCAGGGTCAG CGTCGGCAGA
GCGAGTCTTG ACCAGCTTGC TTACCGCTGG GACGATCTGA GGGCTCTCTC CGGAGATGCA
TCGGCCTGA
 
Protein sequence
MQSSRRFEIR PAEPDDLMMI ASVLVRTWRA TFRGIIADDY LDAMTVEEQA IRHARRMRFP 
GTLMMAAADM DEDRVVGFAN YGKARGMPPA FDRELYELYL LPEFHRAGLG SALVRAVAAH
CQETGGNSLF AWVLKDNPNR AFYERLGARA VAQGRVSVGR ASLDQLAYRW DDLRALSGDA
SA