Gene Smed_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3512 
Symbol 
ID5324400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3716480 
End bp3716944 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID640792464 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001329165 
Protein GI150398698 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCGCATCGAA GGCCGACACG CAAGACATCG TTGTCGACGA GATTTTCCCG 
CACCCGCCGG AGACGATCTG GAAAACCCTG ACCACGGCAA ATCTGATGGG TCGCTGGCTG
ATGGTTCCCG ACGGCTTCGA GCCCGTGGAA GGCAAAGGCT TCACCTACCG GACCACACCG
GCCGGCGACT GGGACGGCAC CATTCACTGC CAGGTGCTGG AAGTGAAGCC CAACGAACGT
TTCGTCTATG CCTGGAAGGG CGGTCATGAG GGAAACGTCG GATACGGCTC ACGCCTGGAT
ACGGTCGTCA CGTTCATCCT CTCAAGAGTC GAAAACGGCA CGCGCCTTCG CCTTGTTCAT
TCAGGCTTCG TGCTGCCGGA GAACGAGACG GCGTTCAGCA AAATGAGCCA AGGCTGGAAG
AAGGTCGTCG AGAACATCGG CGCTATCGCC GGCGCCGAGG GGTGA
 
Protein sequence
MNDAASKADT QDIVVDEIFP HPPETIWKTL TTANLMGRWL MVPDGFEPVE GKGFTYRTTP 
AGDWDGTIHC QVLEVKPNER FVYAWKGGHE GNVGYGSRLD TVVTFILSRV ENGTRLRLVH
SGFVLPENET AFSKMSQGWK KVVENIGAIA GAEG