Gene Smed_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3506 
Symbol 
ID5324394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3711677 
End bp3712186 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID640792458 
ProductMarR family transcriptional regulator 
Protein accessionYP_001329159 
Protein GI150398692 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTGC ATATAACGCG GCTTGCCAAA AGCGTCAATA TAGATGTAAT TGCATATATG 
AACGCGAAAA GGGCGGACAA CAGCGAGCCG ACCGCGGCCG CGACACGGGC ATGGATCGGT
CTGATGCGGG CGCAGCAGCG CACGCTTTCA GCCATCGAAA GAGACTTCAA GGCCGCCGGT
TTGCCGCCGC TTGGCTGGTA CGACGTGCTC TGGGAGCTGG TGAAGGCCGA AGGCGGCCGT
TTGCGCCCCT TCGAGATCGA GGCCCGCACG CTGCTTGCCC AATATAATCT TTCCCGCCTG
ATCGACCGGC TGGAGAGGGA AGGCCTCGTG CAGCGAGAGG CATTCGACGA GGACGCGCGC
GGCTGCTGGG TCGTGGTCAC CGACAAGGGC CGCTCGATGC GCGAGCGCAT GTGGCAGATC
TATGCGCCTT CGATCGCGCG GCATGTCGGC GCAAAGCTTA GCGAAGAAGA GGCAAGCGCG
CTTGCCTCGC TGCTCTCAAA GCTCGGTTGA
 
Protein sequence
MHLHITRLAK SVNIDVIAYM NAKRADNSEP TAAATRAWIG LMRAQQRTLS AIERDFKAAG 
LPPLGWYDVL WELVKAEGGR LRPFEIEART LLAQYNLSRL IDRLEREGLV QREAFDEDAR
GCWVVVTDKG RSMRERMWQI YAPSIARHVG AKLSEEEASA LASLLSKLG