| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3436 |
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| Symbol | |
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| ID | 5324322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3640392 |
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| End bp | 3641630 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792386 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001329089 |
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| Protein GI | 150398622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGAT TCCTTTCCGT CCTGTTCCTG GCCAGCCTGT TCTTTGTCTC CGCCTCCTTC
GCTGCGTCCA GGTCTGACGT CGAAGCGCAG TTCCGCCAAT GGCTTCAAAG CGATCTCTGG
CCGGAAGCGC AGAAAGCCGG CGTATCGAGC GGCGCCTTTA AAGCGGCGTT CAAGGGCGTA
AGGCTCAATT GGGATCTGCC CGACCTCGCG CCGCCCGGCT TCCCCAAGCC GAAGCAGCGC
AAGCAGAGCC AGGCGGAGTT TTCTTCCCCC GGCTCCTATT TCTCGGAAAA GCGCCTGCAG
GGTCTCGCTG CGACAGGCCG CAGTCTTGCC TCTACCCACG CCTCCACCCT GAAGCGCATT
GAAAGGACCT ATGGCGTTCC CGGTACGATC GTCCTGGCCA TCTGGGGCAA GGAGTCCGGC
TTCGGCCGCG CCAAAATCCC GCACCCGATC ATGGATGTGC TGGCGACCAA GGCCTTCATG
TCGACGCGGC CGGAGCTTTT CCGGCGCGAA CTGATCGCGG CGCTCCATAT TCTAGACAGC
GGTGACGTCA AGGAGGCCGA GATGCGCGGC TCCTGGGCCG GCGCCATGGG CCAGCCGCAG
TTCCTGCCTA CGAGCTTCCT GAAATATGCC GTCGATTTCG ACGGGGACGG ACGCCGCGAC
ATCTGGAATT CCGTACCGGA CAGCCTCGCC TCGATCGCCA GTTATCTGGC GCAGAAGGGC
TGGCAGCGCG GGCGCGACTG GGGTTTCGAG GTCGCGATCC CGTCGGGCGT CTCCTGTGCC
CAGGAGGGTC CGGACCTTGC TCGCCCGATC GCCGAATGGG CCGGCATGGG GATCGGCCGC
GTATCGGGCA AGCCCTTCCC GGCGGCAGAA CGCGGGGCCT CAGGCATGAT GCTGGTCCCG
GCGGGCACGC ATGGCCCGCA ATTCATCGTT ACGCCGAACT TCTACGTGAT CAAGGAATAC
AACAATTCCG ACCTCTACGC GCTCTATATA GGCAATCTCG CGGATCGCAT CGCGACCGGC
GGCGGCGCCT TCCGGGGCAA GTGGGGCGAC GTCGGCGGCA TGTTGCGGTC CGATGTGCTC
GGCCTGCAGA AGGCCCTGGT CGCGAAGGGC TACGACGTCG GCAAGGCCGA CGGGCTGCCG
GGCTACAAGA CCCGCCGCTC GCTCGGCGAC TGGCAGGCGA AGAACGGCCT CAAGCCCACC
TGCTTTCCGG ATGTTTCGCT GAAAGCAAAG CTGCGGTGA
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| Protein sequence | MLRFLSVLFL ASLFFVSASF AASRSDVEAQ FRQWLQSDLW PEAQKAGVSS GAFKAAFKGV
RLNWDLPDLA PPGFPKPKQR KQSQAEFSSP GSYFSEKRLQ GLAATGRSLA STHASTLKRI
ERTYGVPGTI VLAIWGKESG FGRAKIPHPI MDVLATKAFM STRPELFRRE LIAALHILDS
GDVKEAEMRG SWAGAMGQPQ FLPTSFLKYA VDFDGDGRRD IWNSVPDSLA SIASYLAQKG
WQRGRDWGFE VAIPSGVSCA QEGPDLARPI AEWAGMGIGR VSGKPFPAAE RGASGMMLVP
AGTHGPQFIV TPNFYVIKEY NNSDLYALYI GNLADRIATG GGAFRGKWGD VGGMLRSDVL
GLQKALVAKG YDVGKADGLP GYKTRRSLGD WQAKNGLKPT CFPDVSLKAK LR
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