Gene Smed_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3426 
Symbol 
ID5324311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3631742 
End bp3632533 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID640792375 
Productcytochrome c class I 
Protein accessionYP_001329079 
Protein GI150398612 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT ATGTGAACAT GGGTGTGGGT GCCTTGTTGG GTACGGTCTT CGTACTGATG 
ACCGTCTCAA TCGCGTCGGA AGGCATTTTC CATTCCGAAG CTCCCGAGAA GGAAGGCTTC
GCGATCGTCG CGGAGGAAAC GGCCGGCGAA GCCGGTGCCG CCGGCGGCGA AGAAGCGAAA
TCCGAGCCGA TCGGGCCTCT GCTCGCCAGC GCCGATGCAC CCGCCGGCGA GGCCGTGTTC
AAGAAATGCG CAAGCTGTCA CACCGTGGAG AAGGGCGGAC CGAACAAGGT CGGCCCTAAT
CTCTGGGACA TCGTCAATCG CCCGATCGCC TCGCATGAGG GCTTCAGCTA TTCCGCCGGC
ATGCAGACCT TTTCCGAAGG CGGCAAGGTC GTGTGGGACT ACGATCACCT GAGCTACTTC
CTCGAAGCGC CGAAAAAGCA CGTGCCGGGC ACGGCCATGG GCTTTGCCGG TCTCAAGAAG
ACCGACGAGC GCGCCAACTT GATCGCCTGG CTGCGTGAGC ATTCGGACAA CCCCGCACCG
CTTCCCGAAG CCGGCGCAGG CTCTACCGAG GCGGCACCCG CCGAAGGTCA GGCGCCCGCC
GCCGCCGAAG GCAACGCGGC CCCTGCTCCC GCTGAAGGCA CTTCCGCTCC AGCTGACACA
GCGGCTCCGC CTCCGGCCGA AGGCGGCGCA GCGCCAGCAC CTGCTGCCGG CAGCGCAGCT
CCGGCACCTG CTGTCGGCGA AACGGCTCCC GCGGGTCAGA CCGGCGCTCC AGCGCCTGCG
CCGGCGAACT GA
 
Protein sequence
MNPYVNMGVG ALLGTVFVLM TVSIASEGIF HSEAPEKEGF AIVAEETAGE AGAAGGEEAK 
SEPIGPLLAS ADAPAGEAVF KKCASCHTVE KGGPNKVGPN LWDIVNRPIA SHEGFSYSAG
MQTFSEGGKV VWDYDHLSYF LEAPKKHVPG TAMGFAGLKK TDERANLIAW LREHSDNPAP
LPEAGAGSTE AAPAEGQAPA AAEGNAAPAP AEGTSAPADT AAPPPAEGGA APAPAAGSAA
PAPAVGETAP AGQTGAPAPA PAN